4pzk: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.==
==Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.==
<StructureSection load='4pzk' size='340' side='right' caption='[[4pzk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='4pzk' size='340' side='right'caption='[[4pzk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4pzk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_anthracis_ames_"ancestor" Bacillus anthracis ames "ancestor"]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4PZK FirstGlance]. <br>
<table><tr><td colspan='2'>[[4pzk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_anthracis_str._'Ames_Ancestor' Bacillus anthracis str. 'Ames Ancestor']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4PZK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4PZK FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BAS0516, BA_0547, cspR, GBAA_0547 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=261594 Bacillus anthracis Ames "Ancestor"])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/tRNA_(cytidine(34)-2'-O)-methyltransferase tRNA (cytidine(34)-2'-O)-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.207 2.1.1.207] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [https://pdbe.org/4pzk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [https://www.ebi.ac.uk/pdbsum/4pzk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzk ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4pzk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4pzk OCA], [http://pdbe.org/4pzk PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4pzk RCSB], [http://www.ebi.ac.uk/pdbsum/4pzk PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4pzk ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/Q81YT5_BACAN Q81YT5_BACAN]] Could methylate the ribose at the nucleotide 34 wobble position in tRNA (By similarity).[HAMAP-Rule:MF_01885]  
[https://www.uniprot.org/uniprot/A0A6L7HQJ3_BACAN A0A6L7HQJ3_BACAN] Could methylate the ribose at the nucleotide 34 wobble position in tRNA.[HAMAP-Rule:MF_01885]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus anthracis ames ancestor]]
[[Category: Bacillus anthracis str. 'Ames Ancestor']]
[[Category: Anderson, W F]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Anderson WF]]
[[Category: Joachimiak, A]]
[[Category: Joachimiak A]]
[[Category: Kim, Y]]
[[Category: Kim Y]]
[[Category: Maltseva, N]]
[[Category: Maltseva N]]
[[Category: Shatsman, S]]
[[Category: Shatsman S]]
[[Category: Alpha-beta-alpha sandwich]]
[[Category: Csgid]]
[[Category: Methyltransferase]]
[[Category: National institute of allergy and infectious disease]]
[[Category: Niaid]]
[[Category: Transferase]]

Latest revision as of 17:24, 20 September 2023

Crystal strucrure of putative RNA methyltransferase from Bacillus anthracis.

4pzk, resolution 1.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA