3mgw: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
 
Line 1: Line 1:


==Thermodynamics and structure of a salmon cold-active goose-type lysozyme==
==Thermodynamics and structure of a salmon cold-active goose-type lysozyme==
<StructureSection load='3mgw' size='340' side='right' caption='[[3mgw]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
<StructureSection load='3mgw' size='340' side='right'caption='[[3mgw]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3mgw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atlantic_salmon Atlantic salmon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MGW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3MGW FirstGlance]. <br>
<table><tr><td colspan='2'>[[3mgw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmo_salar Salmo salar]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MGW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MGW FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lysG, LYG ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=8030 Atlantic salmon])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mgw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mgw OCA], [https://pdbe.org/3mgw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mgw RCSB], [https://www.ebi.ac.uk/pdbsum/3mgw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mgw ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3mgw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mgw OCA], [http://pdbe.org/3mgw PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3mgw RCSB], [http://www.ebi.ac.uk/pdbsum/3mgw PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3mgw ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A6PZ97_SALSA A6PZ97_SALSA]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mg/3mgw_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mg/3mgw_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
Line 35: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Atlantic salmon]]
[[Category: Large Structures]]
[[Category: Lysozyme]]
[[Category: Salmo salar]]
[[Category: Brandsdal, B O]]
[[Category: Brandsdal BO]]
[[Category: Helland, R]]
[[Category: Helland R]]
[[Category: Kyomuhendo, P]]
[[Category: Kyomuhendo P]]
[[Category: Myrnes, B]]
[[Category: Myrnes B]]
[[Category: Nilsen, I W]]
[[Category: Nilsen IW]]
[[Category: Smalas, A O]]
[[Category: Smalas AO]]
[[Category: Differential scanning calorimetry]]
[[Category: Goose-type]]
[[Category: Hydrolase]]
[[Category: Innate immunity]]
[[Category: Refolding]]
[[Category: Salmon]]
[[Category: Thermal tolerance]]

Latest revision as of 16:33, 1 November 2023

Thermodynamics and structure of a salmon cold-active goose-type lysozyme

3mgw, resolution 1.75Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=3mgw&oldid=3935392"