3axm: Difference between revisions
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==Structure of rice Rubisco in complex with 6PG== | ==Structure of rice Rubisco in complex with 6PG== | ||
<StructureSection load='3axm' size='340' side='right' caption='[[3axm]], [[Resolution|resolution]] 1.65Å' scene=''> | <StructureSection load='3axm' size='340' side='right'caption='[[3axm]], [[Resolution|resolution]] 1.65Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3axm]] is a 16 chain structure with sequence from [ | <table><tr><td colspan='2'>[[3axm]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Oryza_sativa_Japonica_Group Oryza sativa Japonica Group]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AXM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AXM FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65Å</td></tr> | ||
<tr id=' | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6PG:6-PHOSPHOGLUCONIC+ACID'>6PG</scene>, <scene name='pdbligand=KCX:LYSINE+NZ-CARBOXYLIC+ACID'>KCX</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NME:METHYLAMINE'>NME</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3axm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3axm OCA], [https://pdbe.org/3axm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3axm RCSB], [https://www.ebi.ac.uk/pdbsum/3axm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3axm ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/RBL_ORYSJ RBL_ORYSJ] RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 23: | Line 21: | ||
==See Also== | ==See Also== | ||
*[[RuBisCO|RuBisCO]] | *[[RuBisCO 3D structures|RuBisCO 3D structures]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Oryza sativa Japonica Group]] | ||
[[Category: Inoue | [[Category: Inoue T]] | ||
[[Category: Ishida | [[Category: Ishida H]] | ||
[[Category: Kai | [[Category: Kai Y]] | ||
[[Category: Kogami | [[Category: Kogami A]] | ||
[[Category: Mae | [[Category: Mae T]] | ||
[[Category: Makino | [[Category: Makino A]] | ||
[[Category: Matsumura | [[Category: Matsumura H]] | ||
[[Category: Mizohata | [[Category: Mizohata E]] | ||
[[Category: Ueno | [[Category: Ueno T]] | ||
[[Category: Yokota | [[Category: Yokota A]] | ||
