2ya2: Difference between revisions
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==Catalytic Module of the Multi-modular glycogen-degrading pneumococcal virulence factor SpuA in complex with an inhibitor.== | ==Catalytic Module of the Multi-modular glycogen-degrading pneumococcal virulence factor SpuA in complex with an inhibitor.== | ||
<StructureSection load='2ya2' size='340' side='right' caption='[[2ya2]], [[Resolution|resolution]] 2.37Å' scene=''> | <StructureSection load='2ya2' size='340' side='right'caption='[[2ya2]], [[Resolution|resolution]] 2.37Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2ya2]] is a 1 chain structure with sequence from [ | <table><tr><td colspan='2'>[[2ya2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YA2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YA2 FirstGlance]. <br> | ||
</td></tr><tr id=' | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.37Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ya2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ya2 OCA], [https://pdbe.org/2ya2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ya2 RCSB], [https://www.ebi.ac.uk/pdbsum/2ya2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ya2 ProSAT]</span></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | |||
</table> | </table> | ||
== Function == | |||
[https://www.uniprot.org/uniprot/PULA_STRPN PULA_STRPN] Virulence factor (By similarity). Involved in the degradation of glycogen of the mammalian host cells (PubMed:21565699). Hydrolyzes the alpha-1,6-branchpoints of glycogen (PubMed:20497336, PubMed:21565699). Hydrolyzes pullulan. Does not hydrolyze dextran (PubMed:20497336). Binds to mouse lung alveolar type II cells that are rich in glycogen stores. Is an alpha-glucan-specific carbohydrate-binding protein, which binds to amylose (pure alpha-(1,4)-linked glucose), amylopectin (alpha-(1,4)-linked glucose with alpha-(1,6) branch points), pullulan (linear polymer of mixed alpha-(1,4)- and alpha-(1,6)-linked glucose) and glycogen (similar to amylopectin with more frequent alpha-(1,6) branch points) in vitro. Does not bind to dextran (a linear polymer of alpha-(1,6)-linked glucose) (PubMed:17187076).[UniProtKB:A0A0H2ZL64]<ref>PMID:17187076</ref> <ref>PMID:20497336</ref> <ref>PMID:21565699</ref> | |||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Streptococcus pneumoniae TIGR4]] | ||
[[Category: | [[Category: Boraston AB]] | ||
[[Category: Burke | [[Category: Burke RD]] | ||
[[Category: Czjzek | [[Category: Czjzek M]] | ||
[[Category: Deng | [[Category: Deng L]] | ||
[[Category: Ficko-Blean | [[Category: Ficko-Blean E]] | ||
[[Category: Hehemann | [[Category: Hehemann JH]] | ||
[[Category: Higgins | [[Category: Higgins MA]] | ||
[[Category: Ogunniyi | [[Category: Lammerts van Bueren A]] | ||
[[Category: Paton | [[Category: Ogunniyi AD]] | ||
[[Category: Pluvinage | [[Category: Paton JC]] | ||
[[Category: Stroeher | [[Category: Pluvinage B]] | ||
[[Category: Vocadlo | [[Category: Stroeher UH]] | ||
[[Category: Warry | [[Category: Vocadlo DJ]] | ||
[[Category: Warry NE]] | |||