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==Crystal Structure of Mutant Chlorite Dismutase from Candidatus Nitrospira defluvii W145F==
==Crystal Structure of Mutant Chlorite Dismutase from Candidatus Nitrospira defluvii W145F==
<StructureSection load='4m07' size='340' side='right' caption='[[4m07]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
<StructureSection load='4m07' size='340' side='right'caption='[[4m07]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4m07]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/"candidatus_nitrospira_defluvii"_spieck_et_al._2006 "candidatus nitrospira defluvii" spieck et al. 2006]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M07 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4M07 FirstGlance]. <br>
<table><tr><td colspan='2'>[[4m07]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrospira_defluvii Nitrospira defluvii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4M07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4M07 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4m05|4m05]], [[4m06|4m06]], [[4m08|4m08]], [[4m09|4m09]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cld, cld1, NIDE1387 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=330214 "Candidatus Nitrospira defluvii" Spieck et al. 2006])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4m07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m07 OCA], [https://pdbe.org/4m07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4m07 RCSB], [https://www.ebi.ac.uk/pdbsum/4m07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4m07 ProSAT]</span></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Chlorite_O(2)-lyase Chlorite O(2)-lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.49 1.13.11.49] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4m07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4m07 OCA], [http://pdbe.org/4m07 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4m07 RCSB], [http://www.ebi.ac.uk/pdbsum/4m07 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4m07 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/B3U4H7_9BACT B3U4H7_9BACT]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Candidatus nitrospira defluvii spieck et al. 2006]]
[[Category: Large Structures]]
[[Category: Djinovic-Carugo, K]]
[[Category: Nitrospira defluvii]]
[[Category: Gysel, K]]
[[Category: Djinovic-Carugo K]]
[[Category: Hagmueller, A]]
[[Category: Gysel K]]
[[Category: Ferredoxin-like fold]]
[[Category: Hagmueller A]]
[[Category: Oxidoreductase]]