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| ==Crystal Structure of SYS-1 at 2.6A resolution== | | ==Crystal Structure of SYS-1 at 2.6A resolution== |
| <StructureSection load='3c2h' size='340' side='right' caption='[[3c2h]], [[Resolution|resolution]] 2.60Å' scene=''> | | <StructureSection load='3c2h' size='340' side='right'caption='[[3c2h]], [[Resolution|resolution]] 2.60Å' scene=''> |
| == Structural highlights == | | == Structural highlights == |
| <table><tr><td colspan='2'>[[3c2h]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2H OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3C2H FirstGlance]. <br> | | <table><tr><td colspan='2'>[[3c2h]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Caenorhabditis_elegans Caenorhabditis elegans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C2H OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C2H FirstGlance]. <br> |
| </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> | | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6Å</td></tr> |
| <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3c2g|3c2g]]</td></tr> | | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">sys-1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=6239 Caenorhabditis elegans])</td></tr> | | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c2h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2h OCA], [https://pdbe.org/3c2h PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c2h RCSB], [https://www.ebi.ac.uk/pdbsum/3c2h PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c2h ProSAT]</span></td></tr> |
| <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3c2h FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c2h OCA], [http://pdbe.org/3c2h PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3c2h RCSB], [http://www.ebi.ac.uk/pdbsum/3c2h PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3c2h ProSAT]</span></td></tr> | |
| </table> | | </table> |
| <div style="background-color:#fffaf0;">
| | == Function == |
| == Publication Abstract from PubMed == | | [https://www.uniprot.org/uniprot/Q9XVI2_CAEEL Q9XVI2_CAEEL] |
| C. elegans SYS-1 has key functional characteristics of a canonical beta-catenin, but no significant sequence similarity. Here, we report the SYS-1 crystal structure, both on its own and in a complex with POP-1, the C. elegans TCF homolog. The two structures possess signature features of canonical beta-catenin and the beta-catenin/TCF complex that could not be predicted by sequence. Most importantly, SYS-1 bears 12 armadillo repeats and the SYS-1/POP-1 interface is anchored by a conserved salt-bridge, the "charged button." We also modeled structures for three other C. elegans beta-catenins to predict the molecular basis of their distinct binding properties. Finally, we generated a phylogenetic tree, using the region of highest structural similarity between SYS-1 and beta-catenin, and found that SYS-1 clusters robustly within the beta-catenin clade. We conclude that the SYS-1 protein belongs to the beta-catenin family and suggest that additional divergent beta-catenins await discovery.
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| The C. elegans SYS-1 protein is a bona fide beta-catenin.,Liu J, Phillips BT, Amaya MF, Kimble J, Xu W Dev Cell. 2008 May;14(5):751-61. PMID:18477457<ref>PMID:18477457</ref>
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| From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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| </div>
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| <div class="pdbe-citations 3c2h" style="background-color:#fffaf0;"></div>
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| == References ==
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| <references/>
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| __TOC__ | | __TOC__ |
| </StructureSection> | | </StructureSection> |
| [[Category: Caenorhabditis elegans]] | | [[Category: Caenorhabditis elegans]] |
| [[Category: Amaya, M F]] | | [[Category: Large Structures]] |
| [[Category: Kimble, J]] | | [[Category: Amaya MF]] |
| [[Category: Liu, J]] | | [[Category: Kimble J]] |
| [[Category: Phillips, B T]] | | [[Category: Liu J]] |
| [[Category: Xu, W]] | | [[Category: Phillips BT]] |
| [[Category: Beta-catenin]]
| | [[Category: Xu W]] |
| [[Category: Caenorhabditis elegan]]
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| [[Category: Cell adhesion]]
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| [[Category: Sys-1]]
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| [[Category: Wnt]]
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