4hpe: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Crystal structure of a putative cell wall hydrolase (CD630_03720) from Clostridium difficile 630 at 2.38 A resolution==
==Crystal structure of a putative cell wall hydrolase (CD630_03720) from Clostridium difficile 630 at 2.38 A resolution==
<StructureSection load='4hpe' size='340' side='right' caption='[[4hpe]], [[Resolution|resolution]] 2.38&Aring;' scene=''>
<StructureSection load='4hpe' size='340' side='right'caption='[[4hpe]], [[Resolution|resolution]] 2.38&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[4hpe]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Clod6 Clod6]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HPE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4HPE FirstGlance]. <br>
<table><tr><td colspan='2'>[[4hpe]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridioides_difficile_630 Clostridioides difficile 630]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4HPE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4HPE FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.38&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=OCS:CYSTEINESULFONIC+ACID'>OCS</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CD630_03720, YP_001086839.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=272563 CLOD6])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4hpe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hpe OCA], [https://pdbe.org/4hpe PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4hpe RCSB], [https://www.ebi.ac.uk/pdbsum/4hpe PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4hpe ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4hpe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4hpe OCA], [http://pdbe.org/4hpe PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4hpe RCSB], [http://www.ebi.ac.uk/pdbsum/4hpe PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4hpe ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q18DB2_CLOD6 Q18DB2_CLOD6]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Clod6]]
[[Category: Clostridioides difficile 630]]
[[Category: Structural genomic]]
[[Category: Large Structures]]
[[Category: Hydrolase]]
[[Category: Jcsg]]
[[Category: Nlpc/p60 ld endopeptidase]]
[[Category: PSI, Protein structure initiative]]
[[Category: Psi-biology]]
[[Category: Slt/lysozyme-like muramidase]]
[[Category: Two domains protein]]

Latest revision as of 15:09, 20 September 2023

Crystal structure of a putative cell wall hydrolase (CD630_03720) from Clostridium difficile 630 at 2.38 A resolution

4hpe, resolution 2.38Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA