|
|
| (4 intermediate revisions by 2 users not shown) |
| Line 22: |
Line 22: |
| <scene name='TATA-Binding_Protein/Symmetrical/5'>two symmetrical halves</scene>. | | <scene name='TATA-Binding_Protein/Symmetrical/5'>two symmetrical halves</scene>. |
|
| |
|
| The interactions of TBP with the DNA TATA box occurs with the minor groove of the DNA. The DNA duplex is bent in a sharp angle and most interactions are non-polar of hydrophobic<ref>PMID:8757291</ref>. | | The interactions of <scene name='10/100866/Cv/2'>TBP with the DNA TATA box occurs with the minor groove of the DNA</scene>. The DNA duplex is bent in a sharp angle and most interactions are non-polar of hydrophobic<ref>PMID:8757291</ref>. |
|
| |
|
| {{Clear}} | | {{Clear}} |
|
| |
| </StructureSection>
| |
|
| |
|
| == 3D Structures of TATA-binding protein == | | == 3D Structures of TATA-binding protein == |
| | [[TATA-binding protein 3D structures]] |
|
| |
|
| Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
| | </StructureSection> |
| {{#tree:id=OrganizedByTopic|openlevels=0|
| |
| | |
| * TBP
| |
| | |
| **[[2z8u]] – TBP – ''Methanococcus janaschii''<br />
| |
| **[[1pcz]] – PwTBP - ''Pyrococcus woesei''<br />
| |
| **[[1vok]] – AtTBP - ''Arabidopsis thaliana''<br />
| |
| **[[1tbp]] – yTBP - yeast<br />
| |
| **[[4b04]] – yTBP (mutant)<br />
| |
| **[[1mp9]] – TBP – ''Sulfolobus acidocaldarius''<br />
| |
| **[[3eik]] – TBP – ''Encephalitozoon cuniculi''
| |
| | |
| * TBP+DNA TATA box
| |
| | |
| **[[1ytb]] - yTBP + DNA TATA<br />
| |
| **[[1cdw]] - hTBP core domain+ DNA TATA - human<br />
| |
| **[[1tgh]] - hTBP + DNA TATA<br />
| |
| **[[1qn5]], [[1qn6]], [[1qn7]], [[1qn8]], [[1qn9]], [[1qna]], [[1qnb]], [[1qnc]], [[1qne]], [[1qn3]], [[1qn4]], [[1vto]] - AtTBP + DNA TATA <br />
| |
| | |
| * TBP+DNA TATA box +TFIIA
| |
| | |
| **[[1rm1]] – yTBP+TFIIA α, β, γ chains+ DNA TATA <br />
| |
| **[[1ytf]] - yTBP+TFIIA + DNA TATA<br />
| |
| **[[1nh2]] – yTBP C-terminal+TFIIA α, β, γ chains+ DNA TATA<br />
| |
| **[[1nvp]] - hTBP C-terminal+ TFIIA α, β, γ chains+ DNA TATA <br />
| |
| **[[1jfi]] - hTBP C-terminal+ TFIIA NC2+ DNA TATA<br />
| |
| | |
| * TBP+DNA TATA box +TFIIB
| |
| | |
| **[[1tba]] – yTBP core domain+TAFII230 fragment - NMR<br />
| |
| **[[1c9b]] - hTBP C-terminal+TFIIBC+adenovirus major late promoter<br />
| |
| **[[1vol]] – AtTBP+hTFIIB+DNA TATA<br />
| |
| **[[1ais]], [[1d3u]] - PwTBP N-terminal+ TFIIB C-terminal + DNA TATA <br />
| |
| **[[1tba]] – yTBP core domain+TAFII230 fragment - NMR<br />
| |
| | |
| * TBP+DNA TATA+TFIIIB
| |
| | |
| **[[1ngm]] - yTBP C-terminal+TFIIIB BRF1 subunit + DNA TATA<br />
| |
| **[[4roc]], [[4rod]], [[4roe]] - hTBP +TFIIIB + DNA TATA<br />
| |
| | |
| * TBP+DNA TATA+TFIIA+TFIID
| |
| | |
| **[[5fur]] - yTBP +TFIIB + TFIID + DNA TATA<br />
| |
| | |
| * TBP in RNA polymerase II complex
| |
| | |
| **[[5fyw]], [[5fz5]], [[5fmf]], [[4v1n]], [[4v1o]] – yTBP + DNA-directed RNA polymerase II + TFII + DNA<br />
| |
| **[[5iy6]], [[5iy7]], [[5iy8]], [[5iy9]], [[5iya]], [[5iyb]], [[5iyc]], [[5iyd]] – hTBP + DNA-directed RNA polymerase II + TFII + DNA<br />
| |
|
| |
|
| }}
| |
| == References == | | == References == |
| <references/> | | <references/> |
| [[Category:Topic Page]] | | [[Category:Topic Page]] |
