5lon: Difference between revisions
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New page: '''Unreleased structure''' The entry 5lon is ON HOLD until Paper Publication Authors: Charenton, C., Taverniti, V., Gaudon-Plesse, C., Back, R., Seraphin, B., Graille, M. Description: ... |
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==Structure of /K. lactis/ Dcp1-Dcp2 decapping complex.== | |||
<StructureSection load='5lon' size='340' side='right'caption='[[5lon]], [[Resolution|resolution]] 3.50Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[5lon]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Kluyveromyces_lactis_NRRL_Y-1140 Kluyveromyces lactis NRRL Y-1140]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5LON OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5LON FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5Å</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5lon FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5lon OCA], [https://pdbe.org/5lon PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5lon RCSB], [https://www.ebi.ac.uk/pdbsum/5lon PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5lon ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q6CIU1_KLULA Q6CIU1_KLULA] | |||
<div style="background-color:#fffaf0;"> | |||
== Publication Abstract from PubMed == | |||
Elimination of the 5' cap of eukaryotic mRNAs, known as decapping, is considered to be a crucial, irreversible and highly regulated step required for the rapid degradation of mRNA by Xrn1, the major cytoplasmic 5'-3' exonuclease. Decapping is accomplished by the recruitment of a protein complex formed by the Dcp2 catalytic subunit and its Dcp1 cofactor. However, this complex has a low intrinsic enzymatic activity and requires several accessory proteins such as the Lsm1-7 complex, Pat1, Edc1-Edc2 and/or Edc3 to be fully active. Here we present the crystal structure of the active form of the yeast Kluyveromyces lactis Dcp1-Dcp2 enzyme bound to its product (m7GDP) and its potent activator Edc3. This structure of the Dcp1-Dcp2 complex bound to a cap analog further explains previously published data on substrate binding and provides hints as to the mechanism of Edc3-mediated Dcp2 activation. | |||
Structure of the active form of Dcp1-Dcp2 decapping enzyme bound to m7GDP and its Edc3 activator.,Charenton C, Taverniti V, Gaudon-Plesse C, Back R, Seraphin B, Graille M Nat Struct Mol Biol. 2016 Oct 3. doi: 10.1038/nsmb.3300. PMID:27694841<ref>PMID:27694841</ref> | |||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |||
[[Category: | </div> | ||
[[Category: | <div class="pdbe-citations 5lon" style="background-color:#fffaf0;"></div> | ||
[[Category: | == References == | ||
[[Category: | <references/> | ||
[[Category: | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Kluyveromyces lactis NRRL Y-1140]] | ||
[[Category: Large Structures]] | |||
[[Category: Back R]] | |||
[[Category: Charenton C]] | |||
[[Category: Gaudon-Plesse C]] | |||
[[Category: Graille M]] | |||
[[Category: Seraphin B]] | |||
[[Category: Taverniti V]] | |||
Latest revision as of 18:37, 18 October 2023
Structure of /K. lactis/ Dcp1-Dcp2 decapping complex.
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