1sef: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(13 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1sef.jpg|left|200px]]


{{Structure
==Crystal structure of cupin domain protein EF2996 from Enterococcus faecalis==
|PDB= 1sef |SIZE=350|CAPTION= <scene name='initialview01'>1sef</scene>, resolution 2.05&Aring;
<StructureSection load='1sef' size='340' side='right'caption='[[1sef]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[1sef]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis_V583 Enterococcus faecalis V583]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SEF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SEF FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
|GENE=  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sef FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sef OCA], [https://pdbe.org/1sef PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sef RCSB], [https://www.ebi.ac.uk/pdbsum/1sef PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sef ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1sef TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1917 COG1917], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK11171 PRK11171]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1sef FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sef OCA], [http://www.ebi.ac.uk/pdbsum/1sef PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1sef RCSB]</span>
[https://www.uniprot.org/uniprot/Q82ZQ3_ENTFA Q82ZQ3_ENTFA]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of cupin domain protein EF2996 from Enterococcus faecalis'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/se/1sef_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
1SEF is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SEF OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Enterococcus faecalis]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sef ConSurf].
[[Category: Almo, S C.]]
<div style="clear:both"></div>
[[Category: Burley, S K.]]
__TOC__
[[Category: Fedorov, A A.]]
</StructureSection>
[[Category: Fedorov, E V.]]
[[Category: Enterococcus faecalis V583]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Large Structures]]
[[Category: new york structural genomix research consortium]]
[[Category: Almo SC]]
[[Category: nysgxrc target t1582]]
[[Category: Burley SK]]
[[Category: protein structure initiative]]
[[Category: Fedorov AA]]
[[Category: psi]]
[[Category: Fedorov EV]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:40:54 2008''

Latest revision as of 08:30, 14 February 2024

Crystal structure of cupin domain protein EF2996 from Enterococcus faecalis

1sef, resolution 2.05Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA