1t07: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(12 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1t07.gif|left|200px]]


{{Structure
==Crystal Structure of Conserved Protein of Unknown Function PA5148 from Pseudomonas aeruginosa==
|PDB= 1t07 |SIZE=350|CAPTION= <scene name='initialview01'>1t07</scene>, resolution 1.80&Aring;
<StructureSection load='1t07' size='340' side='right'caption='[[1t07]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[1t07]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T07 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T07 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE= PA5148 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=287 Pseudomonas aeruginosa])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK05408 PRK05408]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t07 OCA], [https://pdbe.org/1t07 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t07 RCSB], [https://www.ebi.ac.uk/pdbsum/1t07 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t07 ProSAT], [https://www.topsan.org/Proteins/MCSG/1t07 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t07 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t07 OCA], [http://www.ebi.ac.uk/pdbsum/1t07 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1t07 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/FETP_PSEAE FETP_PSEAE] Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes (By similarity).
 
== Evolutionary Conservation ==
'''Crystal Structure of Conserved Protein of Unknown Function PA5148 from Pseudomonas aeruginosa'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t0/1t07_consurf.spt"</scriptWhenChecked>
1T07 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T07 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t07 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Single protein]]
[[Category: Edwards A]]
[[Category: Edwards, A.]]
[[Category: Joachimiak A]]
[[Category: Joachimiak, A.]]
[[Category: Kim Y]]
[[Category: Kim, Y.]]
[[Category: Savchenko A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Skarina T]]
[[Category: Savchenko, A.]]
[[Category: Skarina, T.]]
[[Category: apc5047]]
[[Category: conserved hypothetical protein]]
[[Category: mcsg]]
[[Category: midwest center for structural genomic]]
[[Category: pa5148]]
[[Category: protein structure initiative]]
[[Category: pseudomonas aeruginosa]]
[[Category: psi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 23:49:19 2008''