5x3d: Difference between revisions

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New page: '''Unreleased structure''' The entry 5x3d is ON HOLD until Paper Publication Authors: Tomita, T., Cho, S.H., Kuzuyama, T., Nishiyama, M. Description: Crystal structure of HEP-CMP-bound...
 
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'''Unreleased structure'''


The entry 5x3d is ON HOLD  until Paper Publication
==Crystal structure of HEP-CMP-bound form of cytidylyltransferase (CyTase) domain of Fom1 from Streptomyces wedmorensis==
 
<StructureSection load='5x3d' size='340' side='right'caption='[[5x3d]], [[Resolution|resolution]] 1.93&Aring;' scene=''>
Authors: Tomita, T., Cho, S.H., Kuzuyama, T., Nishiyama, M.
== Structural highlights ==
 
<table><tr><td colspan='2'>[[5x3d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_wedmorensis Streptomyces wedmorensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5X3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5X3D FirstGlance]. <br>
Description: Crystal structure of HEP-CMP-bound form of cytidylyltransferase (CyTase) domain of Fom1 from Streptomyces wedmorensis
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.93&#8491;</td></tr>
[[Category: Unreleased Structures]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7XL:[[(2R,3S,4R,5R)-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-(2-hydroxyethyl)phosphinic+acid'>7XL</scene></td></tr>
[[Category: Tomita, T]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5x3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5x3d OCA], [https://pdbe.org/5x3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5x3d RCSB], [https://www.ebi.ac.uk/pdbsum/5x3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5x3d ProSAT]</span></td></tr>
[[Category: Nishiyama, M]]
</table>
[[Category: Kuzuyama, T]]
== Function ==
[[Category: Cho, S.H]]
[https://www.uniprot.org/uniprot/FOM1_STRWE FOM1_STRWE] Bifunctional enzyme that catalyzes two steps during fosfomycin biosynthesis (PubMed:28727444). It catalyzes the conversion of phosphoenolpyruvate (PEP) to phosphonopyruvate (PnPy), the first step of the pathway. It also catalyzes the cytidylylation of the 2-hydroxyethylphosphonate (HEP) intermediate to produce cytidylyl-2-hydroxyethylphosphonate (HEP-CMP), the fourth step of the pathway (PubMed:28727444).<ref>PMID:28727444</ref>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptomyces wedmorensis]]
[[Category: Cho SH]]
[[Category: Kuzuyama T]]
[[Category: Nishiyama M]]
[[Category: Tomita T]]
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