1t70: Difference between revisions

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[[Image:1t70.gif|left|200px]]


{{Structure
==Crystal structure of a novel phosphatase from Deinococcus radiodurans==
|PDB= 1t70 |SIZE=350|CAPTION= <scene name='initialview01'>1t70</scene>, resolution 2.30&Aring;
<StructureSection load='1t70' size='340' side='right'caption='[[1t70]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[1t70]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T70 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1T70 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
|GENE=  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1t70 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t70 OCA], [https://pdbe.org/1t70 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1t70 RCSB], [https://www.ebi.ac.uk/pdbsum/1t70 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1t70 ProSAT], [https://www.topsan.org/Proteins/BSGC/1t70 TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG1692 COG1692]</span>
</table>
|RELATEDENTRY=[[1mrz|1MRZ]]
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1t70 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1t70 OCA], [http://www.ebi.ac.uk/pdbsum/1t70 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1t70 RCSB]</span>
[https://www.uniprot.org/uniprot/PPDE_DEIRA PPDE_DEIRA] Has a dual activity phosphatase/phosphodiesterase in vitro, with a preference to phosphoenolpyruvate (PEP) and 2',3'-cAMP, respectively. Can also use 2',3'-cGMP, 2',3'-cCMP and various model substrates such as p-nitrophenyl phosphate (pNPP), bis-p-nitrophenyl phosphate (bis-pNPP) and p-nitrophenyl thymidine monophosphate (pNP-TMP).<ref>PMID:17847097</ref>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal structure of a novel phosphatase from Deinococcus radiodurans'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/t7/1t70_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
1T70 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans Deinococcus radiodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1T70 OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Deinococcus radiodurans]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1t70 ConSurf].
[[Category: BSGC, Berkeley Structural Genomics Center.]]
<div style="clear:both"></div>
[[Category: Kim, R.]]
== References ==
[[Category: Kim, S H.]]
<references/>
[[Category: Shin, D H.]]
__TOC__
[[Category: Wang, W.]]
</StructureSection>
[[Category: Yokota, H.]]
[[Category: Deinococcus radiodurans R1]]
[[Category: berkeley structural genomics center]]
[[Category: Large Structures]]
[[Category: bsgc]]
[[Category: Kim R]]
[[Category: crystal]]
[[Category: Kim SH]]
[[Category: phosphatase]]
[[Category: Shin DH]]
[[Category: protein structure initiative]]
[[Category: Wang W]]
[[Category: psi]]
[[Category: Yokota H]]
[[Category: structural genomic]]
[[Category: x-ray crystallography]]
 
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Retrieved from "https://proteopedia.org/1t70"