1ub9: Difference between revisions

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[[Image:1ub9.gif|left|200px]]


{{Structure
==Structure of the transcriptional regulator homologue protein from Pyrococcus horikoshii OT3==
|PDB= 1ub9 |SIZE=350|CAPTION= <scene name='initialview01'>1ub9</scene>, resolution 2.05&Aring;
<StructureSection load='1ub9' size='340' side='right'caption='[[1ub9]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[1ub9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UB9 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
|GENE= PH1061 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 Pyrococcus horikoshii])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ub9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ub9 OCA], [https://pdbe.org/1ub9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ub9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ub9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ub9 ProSAT]</span></td></tr>
|DOMAIN=
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ub9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ub9 OCA], [http://www.ebi.ac.uk/pdbsum/1ub9 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ub9 RCSB]</span>
[https://www.uniprot.org/uniprot/O58788_PYRHO O58788_PYRHO]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Structure of the transcriptional regulator homologue protein from Pyrococcus horikoshii OT3'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ub/1ub9_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
1UB9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UB9 OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==Reference==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ub9 ConSurf].
Structural analysis of the transcriptional regulator homolog protein from Pyrococcus horikoshii OT3., Okada U, Sakai N, Yao M, Watanabe N, Tanaka I, Proteins. 2006 Jun 1;63(4):1084-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16506234 16506234]
<div style="clear:both"></div>
[[Category: Pyrococcus horikoshii]]
__TOC__
[[Category: Single protein]]
</StructureSection>
[[Category: Okada, U.]]
[[Category: Large Structures]]
[[Category: Sakai, N.]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Tajika, Y.]]
[[Category: Okada U]]
[[Category: Tanaka, I.]]
[[Category: Sakai N]]
[[Category: Watanabe, N.]]
[[Category: Tajika Y]]
[[Category: Yao, M.]]
[[Category: Tanaka I]]
[[Category: helix-turn-helix motif]]
[[Category: Watanabe N]]
[[Category: structural genomic]]
[[Category: Yao M]]
[[Category: winged helix motif]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:07:54 2008''
Retrieved from "https://proteopedia.org/1ub9"