1vbl: Difference between revisions

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[[Image:1vbl.gif|left|200px]]


{{Structure
==Structure of the thermostable pectate lyase PL 47==
|PDB= 1vbl |SIZE=350|CAPTION= <scene name='initialview01'>1vbl</scene>, resolution 1.91&Aring;
<StructureSection load='1vbl' size='340' side='right'caption='[[1vbl]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>
<table><tr><td colspan='2'>[[1vbl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_sp._TS-47 Bacillus sp. TS-47]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VBL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VBL FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Pectate_lyase Pectate lyase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.2.2 4.2.2.2] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vbl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vbl OCA], [https://pdbe.org/1vbl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vbl RCSB], [https://www.ebi.ac.uk/pdbsum/1vbl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vbl ProSAT]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vbl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vbl OCA], [http://www.ebi.ac.uk/pdbsum/1vbl PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1vbl RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q9AJM4_9BACI Q9AJM4_9BACI]
 
== Evolutionary Conservation ==
'''Structure of the thermostable pectate lyase PL 47'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vb/1vbl_consurf.spt"</scriptWhenChecked>
1VBL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VBL OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bacteria]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Pectate lyase]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vbl ConSurf].
[[Category: Kitatani, T.]]
<div style="clear:both"></div>
[[Category: Nakaniwa, T.]]
__TOC__
[[Category: Nishimura, K.]]
</StructureSection>
[[Category: Sakai, T.]]
[[Category: Bacillus sp. TS-47]]
[[Category: Tada, T.]]
[[Category: Large Structures]]
[[Category: Takao, M.]]
[[Category: Kitatani T]]
[[Category: Yamaguchi, A.]]
[[Category: Nakaniwa T]]
[[Category: bacillus subtili]]
[[Category: Nishimura K]]
[[Category: calcium ion]]
[[Category: Sakai T]]
[[Category: pectate lyase]]
[[Category: Tada T]]
[[Category: pectin]]
[[Category: Takao M]]
[[Category: pl 47]]
[[Category: Yamaguchi A]]
[[Category: thermostable]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:22:11 2008''
Retrieved from "https://proteopedia.org/1vbl"