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[[Image:1vk0.jpg|left|200px]]


{{Structure
==X-ray Structure of Gene Product from Arabidopsis Thaliana At5g06450==
|PDB= 1vk0 |SIZE=350|CAPTION= <scene name='initialview01'>1vk0</scene>, resolution 2.100&Aring;
<StructureSection load='1vk0' size='340' side='right'caption='[[1vk0]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[1vk0]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VK0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VK0 FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
|GENE= At5g06450 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vk0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vk0 OCA], [https://pdbe.org/1vk0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vk0 RCSB], [https://www.ebi.ac.uk/pdbsum/1vk0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vk0 ProSAT], [https://www.topsan.org/Proteins/CESG/1vk0 TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vk0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vk0 OCA], [http://www.ebi.ac.uk/pdbsum/1vk0 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1vk0 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/RICE2_ARATH RICE2_ARATH] 3'-to-5' exoribonuclease (RNase) specifically targeting single-stranded RNAs (PubMed:28463111). Triggers miRNA accumulation in RNA-induced silencing complex (RISC), composed of miRNAs and AGO proteins, by degrading uridylated cleavage fragments (PubMed:28463111). Required during plant growth and development (By similarity).[UniProtKB:Q9SF21]<ref>PMID:28463111</ref>
 
== Evolutionary Conservation ==
'''X-ray Structure of Gene Product from Arabidopsis Thaliana At5g06450'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vk/1vk0_consurf.spt"</scriptWhenChecked>
1VK0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VK0 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vk0 ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Bingman, C A.]]
[[Category: Bingman CA]]
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
[[Category: Johnson KA]]
[[Category: Johnson, K A.]]
[[Category: Phillips Jr GN]]
[[Category: Jr., G N.Phillips.]]
[[Category: Smith DW]]
[[Category: Smith, D W.]]
[[Category: Wesenberg GE]]
[[Category: Wesenberg, G E.]]
[[Category: arabidopsis thaliana]]
[[Category: at5g06450]]
[[Category: center for eukaryotic structural genomic]]
[[Category: cesg]]
[[Category: homohexamer]]
[[Category: protein]]
[[Category: protein structure initiative]]
[[Category: structural genomic]]
[[Category: unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 00:25:30 2008''
Retrieved from "https://proteopedia.org/1vk0"