1wiv: Difference between revisions
From Proteopedia
Jump to navigationJump to search
No edit summary |
No edit summary |
||
| (11 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA== | |||
<StructureSection load='1wiv' size='340' side='right'caption='[[1wiv]]' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[1wiv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WIV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WIV FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wiv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wiv OCA], [https://pdbe.org/1wiv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wiv RCSB], [https://www.ebi.ac.uk/pdbsum/1wiv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wiv ProSAT], [https://www.topsan.org/Proteins/RSGI/1wiv TOPSAN]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/UBP14_ARATH UBP14_ARATH] Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Involved in seed and embryo development.<ref>PMID:11576424</ref> <ref>PMID:11788751</ref> | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wi/1wiv_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wiv ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | |||
*[[Thioesterase 3D structures|Thioesterase 3D structures]] | |||
== References == | |||
== | <references/> | ||
__TOC__ | |||
</StructureSection> | |||
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Abe | [[Category: Abe T]] | ||
[[Category: Higuchi | [[Category: Higuchi Y]] | ||
[[Category: Hirota | [[Category: Hirota H]] | ||
[[Category: Izumi | [[Category: Izumi K]] | ||
[[Category: Yokoyama S]] | |||
[[Category: Yokoyama | [[Category: Yoshida M]] | ||
[[Category: Yoshida | |||
Latest revision as of 13:42, 9 May 2024
solution structure of RSGI RUH-023, a UBA domain from Arabidopsis cDNA
| ||||||||||||
