1ij2: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==GCN4-pVTL Coiled-coil Trimer with Threonine at the a(16) position==
==GCN4-pVTL Coiled-coil Trimer with Threonine at the a(16) position==
<StructureSection load='1ij2' size='340' side='right' caption='[[1ij2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
<StructureSection load='1ij2' size='340' side='right'caption='[[1ij2]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1ij2]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IJ2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1IJ2 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1ij2]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1IJ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1IJ2 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=CD:CADMIUM+ION'>CD</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ij2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ij2 OCA], [http://pdbe.org/1ij2 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1ij2 RCSB], [http://www.ebi.ac.uk/pdbsum/1ij2 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1ij2 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ij2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ij2 OCA], [https://pdbe.org/1ij2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ij2 RCSB], [https://www.ebi.ac.uk/pdbsum/1ij2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ij2 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/GCN4_YEAST GCN4_YEAST]] Is a transcription factor that is responsible for the activation of more than 30 genes required for amino acid or for purine biosynthesis in response to amino acid or purine starvation. Binds and recognize the DNA sequence: 5'-TGA[CG]TCA-3'.  
[https://www.uniprot.org/uniprot/GCN4_YEAST GCN4_YEAST] Is a transcription factor that is responsible for the activation of more than 30 genes required for amino acid or for purine biosynthesis in response to amino acid or purine starvation. Binds and recognize the DNA sequence: 5'-TGA[CG]TCA-3'.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 21:


==See Also==
==See Also==
*[[Gcn4|Gcn4]]
*[[Gcn4 3D Structures|Gcn4 3D Structures]]
*[[Gnc4 3D Structures|Gnc4 3D Structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Akey, D L]]
[[Category: Large Structures]]
[[Category: Kim, P S]]
[[Category: Saccharomyces cerevisiae S288C]]
[[Category: Malashkevich, V N]]
[[Category: Akey DL]]
[[Category: Gcn4 coiled coil]]
[[Category: Kim PS]]
[[Category: Transcription]]
[[Category: Malashkevich VN]]