5whv: Difference between revisions

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'''Unreleased structure'''


The entry 5whv is ON HOLD  until Paper Publication
==Crystal structure of ArtB==
<StructureSection load='5whv' size='340' side='right'caption='[[5whv]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[5whv]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium_str._DT104 Salmonella enterica subsp. enterica serovar Typhimurium str. DT104]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5WHV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5WHV FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.303&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5whv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5whv OCA], [https://pdbe.org/5whv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5whv RCSB], [https://www.ebi.ac.uk/pdbsum/5whv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5whv ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q404H3_SALTM Q404H3_SALTM]
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
The evolution of virulence traits is central for the emergence or re-emergence of microbial pathogens and for their adaptation to a specific host 1-5 . Typhoid toxin is an essential virulence factor of the human-adapted bacterial pathogen Salmonella Typhi 6,7 , the cause of typhoid fever in humans 8-12 . Typhoid toxin has a unique A2B5 architecture with two covalently linked enzymatic 'A' subunits, PltA and CdtB, associated with a homopentameric 'B' subunit made up of PltB, which has binding specificity for the N-acetylneuraminic acid (Neu5Ac) sialoglycans 6,13 predominantly present in humans 14 . Here, we examine the functional and structural relationship between typhoid toxin and ArtAB, an evolutionarily related AB5 toxin encoded by the broad-host Salmonella Typhimurium 15 . We find that ArtA and ArtB, homologues of PltA and PltB, can form a functional complex with the typhoid toxin CdtB subunit after substitution of a single amino acid in ArtA, while ArtB can form a functional complex with wild-type PltA and CdtB. We also found that, after addition of a single-terminal Cys residue, a CdtB homologue from cytolethal distending toxin can form a functional complex with ArtA and ArtB. In line with the broad host specificity of S. Typhimurium, we found that ArtB binds human glycans, terminated in N-acetylneuraminic acid, as well as glycans terminated in N-glycolylneuraminic acid (Neu5Gc), which are expressed in most other mammals 14 . The atomic structure of ArtB bound to its receptor shows the presence of an additional glycan-binding site, which broadens its binding specificity. Despite equivalent toxicity in vitro, we found that the ArtB/PltA/CdtB chimaeric toxin exhibits reduced lethality in an animal model, indicating that the host specialization of typhoid toxin has optimized its targeting mechanisms to the human host. This is a remarkable example of a toxin evolving to broaden its enzymatic activities and adapt to a specific host.Structural illumination of host glycan interaction in the evolution and host adaptation of the Salmonella typhoid toxin.


Authors: Gao, X., Galan, J.E.
Evolution of host adaptation in the Salmonella typhoid toxin.,Gao X, Deng L, Stack G, Yu H, Chen X, Naito-Matsui Y, Varki A, Galan JE Nat Microbiol. 2017 Oct 9. doi: 10.1038/s41564-017-0033-2. PMID:28993610<ref>PMID:28993610</ref>


Description: Crystal structure of ArtB
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Gao, X]]
<div class="pdbe-citations 5whv" style="background-color:#fffaf0;"></div>
[[Category: Galan, J.E]]
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium str. DT104]]
[[Category: Galan JE]]
[[Category: Gao X]]

Latest revision as of 14:13, 4 October 2023

Crystal structure of ArtB

5whv, resolution 2.30Å

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