Thiolase: Difference between revisions

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<StructureSection load='4c2j' size='450' side='right' caption='Human 3-ketoacyl-CoA complex with CoA and ethylene glycol(PDB code [[4c2j]]).' scene='44/447919/Cv/1'>
<StructureSection load='4c2j' size='350' side='right' caption='Human 3-ketoacyl-CoA complex with CoA and ethylene glycol (PDB code [[4c2j]])' scene='44/447919/Cv/7'>
== Function ==
== Function ==
Two different classes of '''thiolases''' are found.<br />
Two different classes of '''thiolases''' are found.<br />
*'''Degrative thiolase''' like '''3-ketoacyl-CoA thiolase''' (KCT) is involved in fatty acid β oxidation<ref>PMID:16630629</ref>.<br />
*'''Degrative thiolase''' like '''3-ketoacyl-CoA thiolase''' (KCT) is involved in fatty acid [[beta oxidation]]<ref>PMID:16630629</ref>.<br />
*'''Biosynthetic thiolases''' like '''acetoacetyl-CoA thiolase''' (ACT) are involved in the thiolysis of acetoacetyl-CoA<ref>PMID:21908473</ref>.
*'''Biosynthetic thiolases''' like '''acetoacetyl-CoA thiolase''' (ACT) or '''acetyl-CoA acetyltransferase''' are involved in the thiolysis of acetoacetyl-CoA<ref>PMID:21908473</ref>.


For Bacterial thiolase see [[Bacterial thiolase]]
For bacterial thiolase see [[Bacterial thiolase]]
 
*'''SCP2-thiolase''' converts in the bile acid synthesis pathway 24-keto-THC-CoA into choloyl-CoA and propionyl-CoA<ref>PMID:30573650</ref>.  For zebrafish thiolase see [[SCP2-thiolase]]. ''' SCP''' is Sterol Carrier Protein.
*'''U34-tRNA-thiolase''' thiolates uridine 34 in tRNA anticodon loop which guarantees the fidelity of protein translation in archaea<ref>PMID:37005440</ref>.
 
See also [[Mevalonate pathway]]


== Structural highlights ==
== Structural highlights ==
The <scene name='44/447919/Cv/2'>active site of 3-ketoacyl-CoA thiolase contains CoA</scene><ref>PMID:25478839</ref>. Water molecules shown as red spheres.
The <scene name='44/447919/Cv/8'>active site of 3-ketoacyl-CoA thiolase contains CoA</scene><ref>PMID:25478839</ref>. Water molecules are shown as red spheres.
</StructureSection>
== 3D Structures of Thiolase ==
== 3D Structures of Thiolase ==
[[Thiolase 3D structures]]


Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}}
</StructureSection>
{{#tree:id=OrganizedByTopic|openlevels=0|
 
*3-ketoacyl-CoA thiolase
 
**[[2wu9]], [[2c7y]], [[2c7z]] – KCT peroxisomal residues 36-462 – ''Arabidopsis thaliana''<br />
**[[2wua]] - KCT peroxisomal residues 17-449 (mutant) – sunflower<br />
**[[2iik]] – hKCT peroxisomal – human<br />
**[[4c2k]] – hKCT mitochondrial <br />
**[[4c2j]] – hKCT mitochondrial + CoA<br />
**[[3goa]] – KCT – ''Salmonella typhimurium''<br />
**[[5lp7]] – KCT – ''Bacillus subtilis'' <br />
**[[1afw]], [[1pxt]] – yKCT peroxisomal – yeast<br />
**[[5cbq]] – MsKCT – ''Mycobacterium smegmatis'' <br />
**[[4w61]] – ReKCT – ''Ralstonia eutropha''<br />
**[[4ubw]], [[5onc]] – MtKCT – ''Mycobacterium tuberculosis'' <br />
 
*3-ketoacyl-CoA thiolase complex
 
**[[3w15]] - yKCT peroxisomal residues 27-396 + peroxiomal membrane protein PEX21 + peroxisomal targeting signal receptor<br />
**[[2d3t]] – PfKCT + fatty oxidation complex β subunit – ''Pseudomonas fragi''<br />
**[[1wdk]], [[1wdl]], [[1wdm]] - PfKCT + fatty oxidation complex α subunit<br />
**[[5bz4]] – MsKCT + CoA  <br />
**[[4ubt]] – MtKCT (mutant) + CoA + steroid  <br />
**[[4ubu]] – MtKCT (mutant) + CoA  <br />
**[[4ubv]] – MtKCT + CoA + acetyl CoA  <br />
 
*Acetoacetyl-CoA thiolase
 
**[[1m4s]], [[1m4t]], [[1dlu]], [[1qfl]] - ZrACT – ''Zoogloea ramigera''<br />
**[[2wku]], [[2wl6]], [[1m1t]], [[1m3k]] - ZrACT (mutant) <br />
**[[2ib7]], [[2ib8]], [[2ib9]], [[2ibu]], [[2ibw]], [[2iby]], [[2f2s]] – hACT mitochondrial<br />
**[[1wl5]] - hACT cytosolic<br />
**[[4dd5]], [[4e1l]] – ACT – ''Clostridium difficile''<br />
**[[4xl2]], [[4xl3]], [[4n44]], [[4n45]] – CaACT – ''Clostridium acetobutylicum''<br />
**[[4wyr]] – CaACT (mutant) <br />
**[[5f0v]], [[5f38]], [[4wys]] – ACT – ''Escherichia coli'' <br />
**[[4o9a]], [[4o99]], [[4o9c]], [[4nzs]] – ReACT <br />
 
*Acetoacetyl-CoA thiolase complex
 
**[[1dm3]], [[1dlv]] – ZrACT + CoA<br />
**[[2wkt]], [[2wkv]], [[2wl4]], [[2wl5]], [[2vtz]], [[1m3z]] – ZrACT (mutant) + CoA<br />
**[[1m1o]] - ZrACT (mutant) + acetoacetyl-CoA<br />
**[[2vu0]], [[1nl7]] - ZrACT + CoA<br />
**[[2vu1]], [[2vu2]], [[1ou6]] - ZrACT + pantheteine-11-pivalate<br />
**[[1wl4]] – hACT cytosolic + CoA <br />
**[[4xl4]] – CaACT + CoA <br />


}}
== References ==
== References ==
<references/>
<references/>
[[Category:Topic Page]]
[[Category:Topic Page]]

Latest revision as of 10:15, 18 August 2024

Human 3-ketoacyl-CoA complex with CoA and ethylene glycol (PDB code 4c2j)

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References

Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman