1x9f: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Hemoglobin Dodecamer from Lumbricus Erythrocruorin==
==Hemoglobin Dodecamer from Lumbricus Erythrocruorin==
<StructureSection load='1x9f' size='340' side='right' caption='[[1x9f]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
<StructureSection load='1x9f' size='340' side='right'caption='[[1x9f]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1x9f]] is a 12 chain structure with sequence from [http://en.wikipedia.org/wiki/Common_earthworm Common earthworm]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X9F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1X9F FirstGlance]. <br>
<table><tr><td colspan='2'>[[1x9f]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Lumbricus_terrestris Lumbricus terrestris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X9F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X9F FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1x9f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x9f OCA], [http://pdbe.org/1x9f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1x9f RCSB], [http://www.ebi.ac.uk/pdbsum/1x9f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1x9f ProSAT]</span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x9f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x9f OCA], [https://pdbe.org/1x9f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x9f RCSB], [https://www.ebi.ac.uk/pdbsum/1x9f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x9f ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/GLB2_LUMTE GLB2_LUMTE]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x9/1x9f_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x9/1x9f_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 33: Line 36:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Common earthworm]]
[[Category: Large Structures]]
[[Category: Bhyravbhatla, B]]
[[Category: Lumbricus terrestris]]
[[Category: Knapp, J E]]
[[Category: Bhyravbhatla B]]
[[Category: Royer, W E]]
[[Category: Knapp JE]]
[[Category: Strand, K]]
[[Category: Royer Jr WE]]
[[Category: Allosteric]]
[[Category: Strand K]]
[[Category: Crystal]]
[[Category: Dodecamer]]
[[Category: Oxygen storage-transport complex]]
Retrieved from "https://proteopedia.org/1x9f"