2r1f: Difference between revisions

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==Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli==
==Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli==
<StructureSection load='2r1f' size='340' side='right' caption='[[2r1f]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
<StructureSection load='2r1f' size='340' side='right'caption='[[2r1f]], [[Resolution|resolution]] 2.21&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2r1f]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2R1F FirstGlance]. <br>
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R1F FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.21&#8491;</td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">yceG, b1097, JW1083 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1f OCA], [https://pdbe.org/2r1f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r1f RCSB], [https://www.ebi.ac.uk/pdbsum/2r1f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1f ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2r1f TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2r1f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1f OCA], [http://pdbe.org/2r1f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2r1f RCSB], [http://www.ebi.ac.uk/pdbsum/2r1f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1f ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/2r1f TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1f_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1f_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Ecoli]]
[[Category: Large Structures]]
[[Category: Almo, S C]]
[[Category: Almo SC]]
[[Category: Burley, S K]]
[[Category: Burley SK]]
[[Category: Gheyi, T]]
[[Category: Gheyi T]]
[[Category: Lau, C]]
[[Category: Lau C]]
[[Category: Maletic, M]]
[[Category: Maletic M]]
[[Category: Meyer, A J]]
[[Category: Meyer AJ]]
[[Category: Structural genomic]]
[[Category: Patskovsky Y]]
[[Category: Patskovsky, Y]]
[[Category: Ramagopal UA]]
[[Category: Ramagopal, U A]]
[[Category: Rutter M]]
[[Category: Rutter, M]]
[[Category: Sauder JM]]
[[Category: Sauder, J M]]
[[Category: Smith D]]
[[Category: Smith, D]]
[[Category: Toro R]]
[[Category: Toro, R]]
[[Category: Wasserman S]]
[[Category: Wasserman, S]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: Pfam 02618]]
[[Category: PSI, Protein structure initiative]]
[[Category: Unknown function]]

Latest revision as of 08:36, 30 October 2024

Crystal structure of predicted aminodeoxychorismate lyase from Escherichia coli

2r1f, resolution 2.21Å

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