3lay: Difference between revisions

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==Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2==
==Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2==
<StructureSection load='3lay' size='340' side='right' caption='[[3lay]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
<StructureSection load='3lay' size='340' side='right'caption='[[3lay]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3lay]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_typhimurium"_loeffler_1892 "bacillus typhimurium" loeffler 1892]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAY OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LAY FirstGlance]. <br>
<table><tr><td colspan='2'>[[3lay]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LAY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LAY FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">STM4172, STMF1.61, zraP ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 "Bacillus typhimurium" Loeffler 1892])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lay OCA], [http://pdbe.org/3lay PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3lay RCSB], [http://www.ebi.ac.uk/pdbsum/3lay PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3lay ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lay FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lay OCA], [https://pdbe.org/3lay PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lay RCSB], [https://www.ebi.ac.uk/pdbsum/3lay PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lay ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/ZRAP_SALTY ZRAP_SALTY]] Binds zinc. Could be an important component of the zinc-balancing mechanism (By similarity).  
[https://www.uniprot.org/uniprot/ZRAP_SALTY ZRAP_SALTY] Binds zinc. Could be an important component of the zinc-balancing mechanism (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/la/3lay_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/la/3lay_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus typhimurium loeffler 1892]]
[[Category: Large Structures]]
[[Category: Anderson, W F]]
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
[[Category: Structural genomic]]
[[Category: Anderson WF]]
[[Category: Dubrovska, I]]
[[Category: Dubrovska I]]
[[Category: Filippova, E V]]
[[Category: Filippova EV]]
[[Category: Minasov, G]]
[[Category: Minasov G]]
[[Category: Shuvalova, L]]
[[Category: Shuvalova L]]
[[Category: Winsor, J]]
[[Category: Winsor J]]
[[Category: Csgid]]
[[Category: Metal binding protein]]
[[Category: Salmonella typhimurium lt2]]
[[Category: Zinc resistance-associated protein]]
[[Category: Zrap]]

Latest revision as of 10:19, 21 February 2024

Alpha-Helical barrel formed by the decamer of the zinc resistance-associated protein (STM4172) from Salmonella enterica subsp. enterica serovar Typhimurium str. LT2

3lay, resolution 2.70Å

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