3sng: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==X-ray structure of fully glycosylated bifunctional nuclease TBN1 from Solanum lycopersicum (Tomato)==
==X-ray structure of fully glycosylated bifunctional nuclease TBN1 from Solanum lycopersicum (Tomato)==
<StructureSection load='3sng' size='340' side='right' caption='[[3sng]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
<StructureSection load='3sng' size='340' side='right'caption='[[3sng]], [[Resolution|resolution]] 2.16&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3sng]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Lycopersicon_esculentum Lycopersicon esculentum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SNG FirstGlance]. <br>
<table><tr><td colspan='2'>[[3sng]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Solanum_lycopersicum Solanum lycopersicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SNG FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.16&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tbn1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4081 Lycopersicon esculentum])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sng OCA], [http://pdbe.org/3sng PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3sng RCSB], [http://www.ebi.ac.uk/pdbsum/3sng PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3sng ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sng FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sng OCA], [https://pdbe.org/3sng PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sng RCSB], [https://www.ebi.ac.uk/pdbsum/3sng PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sng ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q0KFV0_SOLLC Q0KFV0_SOLLC]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 23:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Lycopersicon esculentum]]
[[Category: Large Structures]]
[[Category: Dohnalek, J]]
[[Category: Solanum lycopersicum]]
[[Category: Duskova, J]]
[[Category: Dohnalek J]]
[[Category: Hasek, J]]
[[Category: Duskova J]]
[[Category: Koval, T]]
[[Category: Hasek J]]
[[Category: Lipovova, P]]
[[Category: Koval T]]
[[Category: Matousek, J]]
[[Category: Lipovova P]]
[[Category: Podzimek, T]]
[[Category: Matousek J]]
[[Category: Skalova, T]]
[[Category: Podzimek T]]
[[Category: Stepankova, A]]
[[Category: Skalova T]]
[[Category: 3'-nucleotidase]]
[[Category: Stepankova A]]
[[Category: Bi-functional]]
[[Category: Cytosol membrane associated]]
[[Category: Endonuclease]]
[[Category: Hydrolase]]
[[Category: Mainly alpha helical]]
[[Category: Mononucleotide]]
[[Category: Nucleic acid]]
[[Category: Trinuclear metal centre]]
Retrieved from "https://proteopedia.org/3sng"