2aq2: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2aq2.gif|left|200px]]


{{Structure
==Crystal structure of T-cell receptor V beta domain variant complexed with superantigen SEC3 mutant==
|PDB= 2aq2 |SIZE=350|CAPTION= <scene name='initialview01'>2aq2</scene>, resolution 1.800&Aring;
<StructureSection load='2aq2' size='340' side='right'caption='[[2aq2]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
<table><tr><td colspan='2'>[[2aq2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [https://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQ2 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE= entC3 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1280 Staphylococcus aureus])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq2 OCA], [https://pdbe.org/2aq2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aq2 RCSB], [https://www.ebi.ac.uk/pdbsum/2aq2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aq2 ProSAT]</span></td></tr>
|RELATEDENTRY=[[2apb|2APB]], [[2apf|2APF]], [[2apt|2APT]], [[2apv|2APV]], [[2apw|2APW]], [[2apx|2APX]], [[2aq1|2AQ1]], [[2aq3|2AQ3]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aq2 OCA], [http://www.ebi.ac.uk/pdbsum/2aq2 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2aq2 RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/TVB5_MOUSE TVB5_MOUSE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aq2_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2aq2 ConSurf].
<div style="clear:both"></div>


'''Crystal structure of T-cell receptor V beta domain variant complexed with superantigen SEC3 mutant'''
==See Also==
 
*[[T-cell receptor 3D structures|T-cell receptor 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
2AQ2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus] and [http://en.wikipedia.org/wiki/Staphylococcus_aureus Staphylococcus aureus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQ2 OCA].
[[Category: Large Structures]]
 
==Reference==
The nitty-gritty of protein interactions., Schreiber G, Structure. 2005 Dec;13(12):1737-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16338399 16338399]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Single protein]]
[[Category: Staphylococcus aureus]]
[[Category: Staphylococcus aureus]]
[[Category: Cho, S.]]
[[Category: Cho S]]
[[Category: Guan, R.]]
[[Category: Guan R]]
[[Category: Kerzic, M C.]]
[[Category: Kerzic MC]]
[[Category: Kieke, M C.]]
[[Category: Kieke MC]]
[[Category: Kranz, D M.]]
[[Category: Kranz DM]]
[[Category: Mariuzza, R A.]]
[[Category: Mariuzza RA]]
[[Category: Sundberg, E J.]]
[[Category: Sundberg EJ]]
[[Category: Swaminathan, C P.]]
[[Category: Swaminathan CP]]
[[Category: Yang, J.]]
[[Category: Yang J]]
[[Category: complex structure]]
[[Category: staphlococcal enterotoxin c3]]
[[Category: t-cell receptor v beta domain]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:55:47 2008''

Latest revision as of 00:47, 21 November 2024

Crystal structure of T-cell receptor V beta domain variant complexed with superantigen SEC3 mutant

2aq2, resolution 1.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2aq2&oldid=4269644"