2bdt: Difference between revisions

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[[Image:2bdt.jpg|left|200px]]


{{Structure
==Crystal Structure of the Putative Gluconate Kinase from Bacillus halodurans, Northeast Structural Genomics Target BhR61==
|PDB= 2bdt |SIZE=350|CAPTION= <scene name='initialview01'>2bdt</scene>, resolution 2.40&Aring;
<StructureSection load='2bdt' size='340' side='right'caption='[[2bdt]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>
<table><tr><td colspan='2'>[[2bdt]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Alkalihalobacillus_halodurans_C-125 Alkalihalobacillus halodurans C-125]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDT OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BDT FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
|GENE= BH3686 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=86665 Bacillus halodurans])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd02021 GntK], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=smart00382 AAA]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bdt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bdt OCA], [https://pdbe.org/2bdt PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bdt RCSB], [https://www.ebi.ac.uk/pdbsum/2bdt PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bdt ProSAT], [https://www.topsan.org/Proteins/NESGC/2bdt TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2bdt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bdt OCA], [http://www.ebi.ac.uk/pdbsum/2bdt PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2bdt RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q9K6P2_HALH5 Q9K6P2_HALH5]
 
== Evolutionary Conservation ==
'''Crystal Structure of the Putative Gluconate Kinase from Bacillus halodurans, Northeast Structural Genomics Target BhR61'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bd/2bdt_consurf.spt"</scriptWhenChecked>
2BDT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_halodurans Bacillus halodurans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BDT OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Bacillus halodurans]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Single protein]]
  </jmolCheckbox>
[[Category: Abashidze, M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bdt ConSurf].
[[Category: Acton, T B.]]
<div style="clear:both"></div>
[[Category: Cooper, B.]]
__TOC__
[[Category: Forouhar, F.]]
</StructureSection>
[[Category: Hunt, J F.]]
[[Category: Alkalihalobacillus halodurans C-125]]
[[Category: Janjua, H.]]
[[Category: Large Structures]]
[[Category: Jayaraman, S.]]
[[Category: Abashidze M]]
[[Category: Montelione, G T.]]
[[Category: Acton TB]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Cooper B]]
[[Category: Tong, L.]]
[[Category: Forouhar F]]
[[Category: Xiao, R.]]
[[Category: Hunt JF]]
[[Category: alpha-beta protein]]
[[Category: Janjua H]]
[[Category: nesg]]
[[Category: Jayaraman S]]
[[Category: northeast structural genomics consortium]]
[[Category: Montelione GT]]
[[Category: protein structure initiative]]
[[Category: Tong L]]
[[Category: psi]]
[[Category: Xiao R]]
[[Category: structural genomic]]
 
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Retrieved from "https://proteopedia.org/2bdt"