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[[Image:2d8a.gif|left|200px]]


{{Structure
==Crystal Structure of PH0655 from Pyrococcus horikoshii OT3==
|PDB= 2d8a |SIZE=350|CAPTION= <scene name='initialview01'>2d8a</scene>, resolution 2.05&Aring;
<StructureSection load='2d8a' size='340' side='right'caption='[[2d8a]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
<table><tr><td colspan='2'>[[2d8a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D8A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D8A FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/L-threonine_3-dehydrogenase L-threonine 3-dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.103 1.1.1.103] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
|GENE=
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d8a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d8a OCA], [https://pdbe.org/2d8a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d8a RCSB], [https://www.ebi.ac.uk/pdbsum/2d8a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d8a ProSAT], [https://www.topsan.org/Proteins/RSGI/2d8a TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d8a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d8a OCA], [http://www.ebi.ac.uk/pdbsum/2d8a PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2d8a RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/TDH_PYRHO TDH_PYRHO]
 
== Evolutionary Conservation ==
'''Crystal Structure of PH0655 from Pyrococcus horikoshii OT3'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d8/2d8a_consurf.spt"</scriptWhenChecked>
2D8A is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D8A OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: L-threonine 3-dehydrogenase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Pyrococcus horikoshii]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d8a ConSurf].
[[Category: Asada, Y.]]
<div style="clear:both"></div>
[[Category: Kunishima, N.]]
__TOC__
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
</StructureSection>
[[Category: national project on protein structural and functional analyse]]
[[Category: Large Structures]]
[[Category: nppsfa]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: ph0655]]
[[Category: Asada Y]]
[[Category: pyrococcus horikoshii ot3]]
[[Category: Kunishima N]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:31:14 2008''

Latest revision as of 07:50, 23 October 2024

Crystal Structure of PH0655 from Pyrococcus horikoshii OT3

2d8a, resolution 2.05Å

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