2d93: Difference between revisions

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[[Image:2d93.gif|left|200px]]


{{Structure
==Solution structure of the cNMP_binding domain of human Rap guanine nucleotide exchange factor 6==
|PDB= 2d93 |SIZE=350|CAPTION= <scene name='initialview01'>2d93</scene>
<StructureSection load='2d93' size='340' side='right'caption='[[2d93]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2d93]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D93 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D93 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
|GENE= KAZUSA cDNA ha02566 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d93 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d93 OCA], [https://pdbe.org/2d93 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d93 RCSB], [https://www.ebi.ac.uk/pdbsum/2d93 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d93 ProSAT], [https://www.topsan.org/Proteins/RSGI/2d93 TOPSAN]</span></td></tr>
|DOMAIN=
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2d93 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d93 OCA], [http://www.ebi.ac.uk/pdbsum/2d93 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2d93 RCSB]</span>
[https://www.uniprot.org/uniprot/RPGF6_HUMAN RPGF6_HUMAN] Guanine nucleotide exchange factor (GEF) for Rap1A, Rap2A and M-Ras GTPases. Does not interact with cAMP.<ref>PMID:12581858</ref> <ref>PMID:11524421</ref>
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Solution structure of the cNMP_binding domain of human Rap guanine nucleotide exchange factor 6'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d9/2d93_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2D93 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D93 OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d93 ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Hayashi, F.]]
[[Category: Hayashi F]]
[[Category: Inoue, K.]]
[[Category: Inoue K]]
[[Category: Muto, Y.]]
[[Category: Muto Y]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: cnmp_binding domain]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: pdz domain containing guanine nucleotide exchange factor 2]]
[[Category: pdz-gef2]]
[[Category: ra-gef-2]]
[[Category: rap guanine nucleotide exchange factor 6]]
[[Category: rapgef6]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:31:34 2008''

Latest revision as of 11:35, 22 May 2024

Solution structure of the cNMP_binding domain of human Rap guanine nucleotide exchange factor 6

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