1w4y: Difference between revisions

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==Ferrous horseradish peroxidase C1A in complex with carbon monoxide==
==Ferrous horseradish peroxidase C1A in complex with carbon monoxide==
<StructureSection load='1w4y' size='340' side='right' caption='[[1w4y]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='1w4y' size='340' side='right'caption='[[1w4y]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1w4y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Armru Armru]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W4Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1W4Y FirstGlance]. <br>
<table><tr><td colspan='2'>[[1w4y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Armoracia_rusticana Armoracia rusticana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W4Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W4Y FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1atj|1atj]], [[1gw2|1gw2]], [[1gwo|1gwo]], [[1gwt|1gwt]], [[1gwu|1gwu]], [[1gx2|1gx2]], [[1h55|1h55]], [[1h57|1h57]], [[1h58|1h58]], [[1h5a|1h5a]], [[1h5c|1h5c]], [[1h5d|1h5d]], [[1h5e|1h5e]], [[1h5f|1h5f]], [[1h5g|1h5g]], [[1h5h|1h5h]], [[1h5i|1h5i]], [[1h5j|1h5j]], [[1h5k|1h5k]], [[1h5l|1h5l]], [[1h5m|1h5m]], [[1hch|1hch]], [[1kzm|1kzm]], [[1w4w|1w4w]], [[2atj|2atj]], [[3atj|3atj]], [[4atj|4atj]], [[6atj|6atj]], [[7atj|7atj]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peroxidase Peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.7 1.11.1.7] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w4y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w4y OCA], [https://pdbe.org/1w4y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w4y RCSB], [https://www.ebi.ac.uk/pdbsum/1w4y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w4y ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1w4y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w4y OCA], [http://pdbe.org/1w4y PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1w4y RCSB], [http://www.ebi.ac.uk/pdbsum/1w4y PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1w4y ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU]] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.  
[https://www.uniprot.org/uniprot/PER1A_ARMRU PER1A_ARMRU] Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w4/1w4y_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w4/1w4y_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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</div>
</div>
<div class="pdbe-citations 1w4y" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 1w4y" style="background-color:#fffaf0;"></div>
==See Also==
*[[Horseradish peroxidase|Horseradish peroxidase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Armru]]
[[Category: Armoracia rusticana]]
[[Category: Peroxidase]]
[[Category: Large Structures]]
[[Category: Berglund, G I]]
[[Category: Berglund GI]]
[[Category: Carlsson, G H]]
[[Category: Carlsson GH]]
[[Category: Hajdu, J]]
[[Category: Hajdu J]]
[[Category: Nicholls, P]]
[[Category: Nicholls P]]
[[Category: Svistunenko, D]]
[[Category: Svistunenko D]]
[[Category: Calcium]]
[[Category: Carbon monoxide]]
[[Category: Ferrous state]]
[[Category: Glycoprotein]]
[[Category: Heme]]
[[Category: Horseradish]]
[[Category: Iron]]
[[Category: Multigene family]]
[[Category: Oxidoreductase]]
[[Category: Pyrrolidone carboxylic acid]]
Retrieved from "https://proteopedia.org/1w4y"