1j3a: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,615 edits
No edit summary
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:


==Crystal structure of ribosomal protein L13 from Pyrococcus horikoshii==
==Crystal structure of ribosomal protein L13 from Pyrococcus horikoshii==
<StructureSection load='1j3a' size='340' side='right' caption='[[1j3a]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
<StructureSection load='1j3a' size='340' side='right'caption='[[1j3a]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1j3a]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/'pyrococcus_shinkaii' 'pyrococcus shinkaii']. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J3A OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1J3A FirstGlance]. <br>
<table><tr><td colspan='2'>[[1j3a]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J3A OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J3A FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PH1634 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 'Pyrococcus shinkaii'])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1j3a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j3a OCA], [http://pdbe.org/1j3a PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1j3a RCSB], [http://www.ebi.ac.uk/pdbsum/1j3a PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1j3a ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j3a FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j3a OCA], [https://pdbe.org/1j3a PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j3a RCSB], [https://www.ebi.ac.uk/pdbsum/1j3a PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j3a ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RL13_PYRHO RL13_PYRHO]] This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity).  
[https://www.uniprot.org/uniprot/RL13_PYRHO RL13_PYRHO] This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 19: Line 19:
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j3a ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j3a ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
==See Also==
*[[Ribosomal protein L13|Ribosomal protein L13]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Pyrococcus shinkaii]]
[[Category: Large Structures]]
[[Category: Kawamura, S]]
[[Category: Pyrococcus horikoshii]]
[[Category: Kazama, T]]
[[Category: Kawamura S]]
[[Category: Kimura, M]]
[[Category: Kazama T]]
[[Category: Nakashima, T]]
[[Category: Kimura M]]
[[Category: Tanaka, I]]
[[Category: Nakashima T]]
[[Category: Tanaka, M]]
[[Category: Tanaka I]]
[[Category: Yao, M]]
[[Category: Tanaka M]]
[[Category: Ribosomal assembly]]
[[Category: Yao M]]
[[Category: Ribosomal protein]]
[[Category: Ribosome]]
[[Category: Rrna binding]]
Retrieved from "https://proteopedia.org/1j3a"