2dj3: Difference between revisions

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[[Image:2dj3.gif|left|200px]]


{{Structure
==The solution structure of the third thioredoxin domain of mouse Protein disulfide-isomerase A4==
|PDB= 2dj3 |SIZE=350|CAPTION= <scene name='initialview01'>2dj3</scene>
<StructureSection load='2dj3' size='340' side='right'caption='[[2dj3]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2dj3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DJ3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DJ3 FirstGlance]. <br>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein_disulfide-isomerase Protein disulfide-isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.3.4.1 5.3.4.1] </span>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
|GENE= Pdia4, Cai, Erp72 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10090 Mus musculus])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dj3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dj3 OCA], [https://pdbe.org/2dj3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dj3 RCSB], [https://www.ebi.ac.uk/pdbsum/2dj3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dj3 ProSAT], [https://www.topsan.org/Proteins/RSGI/2dj3 TOPSAN]</span></td></tr>
|DOMAIN=
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dj3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dj3 OCA], [http://www.ebi.ac.uk/pdbsum/2dj3 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2dj3 RCSB]</span>
[https://www.uniprot.org/uniprot/PDIA4_MOUSE PDIA4_MOUSE]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''The solution structure of the third thioredoxin domain of mouse Protein disulfide-isomerase A4'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dj/2dj3_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2DJ3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DJ3 OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dj3 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Protein disulfide-isomerase]]
[[Category: Inoue M]]
[[Category: Single protein]]
[[Category: Kigawa T]]
[[Category: Inoue, M.]]
[[Category: Koshiba S]]
[[Category: Kigawa, T.]]
[[Category: Sato M]]
[[Category: Koshiba, S.]]
[[Category: Tochio N]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama S]]
[[Category: Sato, M.]]
[[Category: Tochio, N.]]
[[Category: Yokoyama, S.]]
[[Category: cai]]
[[Category: erp72]]
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: protein erp-72]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:35:16 2008''
Retrieved from "https://proteopedia.org/2dj3"