2pk8: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,330,058 edits
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus==
==Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus==
<StructureSection load='2pk8' size='340' side='right' caption='[[2pk8]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
<StructureSection load='2pk8' size='340' side='right'caption='[[2pk8]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2pk8]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrfu Pyrfu]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1she 1she]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PK8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PK8 FirstGlance]. <br>
<table><tr><td colspan='2'>[[2pk8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PK8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PK8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AUC:GOLD+(I)+CYANIDE+ION'>AUC</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PF0899 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=186497 PYRFU])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AUC:GOLD+(I)+CYANIDE+ION'>AUC</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2pk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pk8 OCA], [http://pdbe.org/2pk8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2pk8 RCSB], [http://www.ebi.ac.uk/pdbsum/2pk8 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2pk8 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pk8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pk8 OCA], [https://pdbe.org/2pk8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pk8 RCSB], [https://www.ebi.ac.uk/pdbsum/2pk8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pk8 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8U2E0_PYRFU Q8U2E0_PYRFU]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pk8_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pk/2pk8_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 31: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Pyrfu]]
[[Category: Large Structures]]
[[Category: Adams, M W.W]]
[[Category: Pyrococcus furiosus DSM 3638]]
[[Category: Chen, L]]
[[Category: Adams MWW]]
[[Category: Clancy-Kelley, L L]]
[[Category: Chen L]]
[[Category: Dillard, B D]]
[[Category: Clancy-Kelley LL]]
[[Category: III, F L.Poole]]
[[Category: Dillard BD]]
[[Category: Izumi, M]]
[[Category: Izumi M]]
[[Category: Jenny, F E]]
[[Category: Jenny Jr FE]]
[[Category: Lee, D]]
[[Category: Lee D]]
[[Category: Lee, H S]]
[[Category: Lee HS]]
[[Category: Liu, Z J]]
[[Category: Liu ZJ]]
[[Category: Richardson, D C]]
[[Category: Poole III FL]]
[[Category: Richardson, J S]]
[[Category: Richardson DC]]
[[Category: Rose, J P]]
[[Category: Richardson JS]]
[[Category: Structural genomic]]
[[Category: Rose JP]]
[[Category: Shah, A]]
[[Category: Shah A]]
[[Category: Shah, C]]
[[Category: Shah C]]
[[Category: Sugar, F J]]
[[Category: Sugar FJ]]
[[Category: Tempel, W]]
[[Category: Tempel W]]
[[Category: Wang, B C]]
[[Category: Wang B-C]]
[[Category: Pf0899]]
[[Category: PSI, Protein structure initiative]]
[[Category: Pyrococcus furiosus]]
[[Category: Secsg]]
[[Category: Uncharacterized protein]]
[[Category: Unknown function]]

Latest revision as of 08:28, 13 August 2026

Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus

2pk8, resolution 1.85Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=2pk8&oldid=4477345"