2do8: Difference between revisions

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[[Image:2do8.gif|left|200px]]


{{Structure
==Solution Structure of UPF0301 protein HD_1794==
|PDB= 2do8 |SIZE=350|CAPTION= <scene name='initialview01'>2do8</scene>
<StructureSection load='2do8' size='340' side='right'caption='[[2do8]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2do8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Haemophilus_ducreyi Haemophilus ducreyi]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DO8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DO8 FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
|GENE= OrderedLocusNames: HD_1794 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=730 Haemophilus ducreyi])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2do8 OCA], [https://pdbe.org/2do8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2do8 RCSB], [https://www.ebi.ac.uk/pdbsum/2do8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2do8 ProSAT], [https://www.topsan.org/Proteins/NESGC/2do8 TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=PRK00228 PRK00228]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2do8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2do8 OCA], [http://www.ebi.ac.uk/pdbsum/2do8 PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2do8 RCSB]</span>
[https://www.uniprot.org/uniprot/Y1794_HAEDU Y1794_HAEDU]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Solution Structure of UPF0301 protein HD_1794'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/do/2do8_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2DO8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Haemophilus_ducreyi Haemophilus ducreyi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DO8 OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Haemophilus ducreyi]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2do8 ConSurf].
[[Category: Acton, T R.]]
<div style="clear:both"></div>
[[Category: Cunningham, K.]]
__TOC__
[[Category: Jiang, M.]]
</StructureSection>
[[Category: Liu, G.]]
[[Category: Large Structures]]
[[Category: Ma, L C.]]
[[Category: Acton TR]]
[[Category: Montelione, G T.]]
[[Category: Cunningham K]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Jiang M]]
[[Category: Shastry, R.]]
[[Category: Liu G]]
[[Category: Szyperski, T.]]
[[Category: Ma LC]]
[[Category: Xiao, R.]]
[[Category: Montelione GT]]
[[Category: Zhang, Q.]]
[[Category: Shastry R]]
[[Category: gft nmr]]
[[Category: Szyperski T]]
[[Category: hdr14]]
[[Category: Xiao R]]
[[Category: nesg]]
[[Category: Zhang Q]]
[[Category: northeast structural genomics consortium]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structral genomic]]
[[Category: structural genomic]]
 
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Retrieved from "https://proteopedia.org/2do8"