3iti: Difference between revisions

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==Structure of bovine trypsin with the MAD triangle B3C==
==Structure of bovine trypsin with the MAD triangle B3C==
<StructureSection load='3iti' size='340' side='right' caption='[[3iti]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
<StructureSection load='3iti' size='340' side='right'caption='[[3iti]], [[Resolution|resolution]] 1.55&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3iti]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ITI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ITI FirstGlance]. <br>
<table><tr><td colspan='2'>[[3iti]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ITI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ITI FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=BRV:5-AMINO-2,4,6-TRIBROMOBENZENE-1,3-DICARBOXYLIC+ACID'>BRV</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.55&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3e3d|3e3d]], [[3e3s|3e3s]], [[3e3t|3e3t]], [[3gt3|3gt3]], [[3gt4|3gt4]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=BRV:5-AMINO-2,4,6-TRIBROMOBENZENE-1,3-DICARBOXYLIC+ACID'>BRV</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3iti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iti OCA], [https://pdbe.org/3iti PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3iti RCSB], [https://www.ebi.ac.uk/pdbsum/3iti PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3iti ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3iti FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3iti OCA], [http://pdbe.org/3iti PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3iti RCSB], [http://www.ebi.ac.uk/pdbsum/3iti PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3iti ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/it/3iti_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/it/3iti_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
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</div>
</div>
<div class="pdbe-citations 3iti" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3iti" style="background-color:#fffaf0;"></div>
==See Also==
*[[Trypsin 3D structures|Trypsin 3D structures]]
== References ==
== References ==
<references/>
<references/>
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</StructureSection>
</StructureSection>
[[Category: Bos taurus]]
[[Category: Bos taurus]]
[[Category: Trypsin]]
[[Category: Large Structures]]
[[Category: Beck, T]]
[[Category: Beck T]]
[[Category: Cunha, C E.da]]
[[Category: Sheldrick GM]]
[[Category: Sheldrick, G M]]
[[Category: Da Cunha CE]]
[[Category: 5-amino-2]]
[[Category: 6-tribromoisophthalic acid]]
[[Category: B3c]]
[[Category: Digestion]]
[[Category: Disulfide bond]]
[[Category: Hydrolase]]
[[Category: I3c]]
[[Category: Mad triangle]]
[[Category: Magic triangle]]
[[Category: Metal-binding]]
[[Category: Phasing tool]]
[[Category: Protease]]
[[Category: Secreted]]
[[Category: Serine protease]]
[[Category: Zymogen]]

Latest revision as of 05:54, 17 October 2024

Structure of bovine trypsin with the MAD triangle B3C

3iti, resolution 1.55Å

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