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==Crystal structure of deoxyribose phosphate aldolase from mycobacterium smegmatis==
==Crystal structure of deoxyribose phosphate aldolase from mycobacterium smegmatis==
<StructureSection load='3ndo' size='340' side='right' caption='[[3ndo]], [[Resolution|resolution]] 1.25&Aring;' scene=''>
<StructureSection load='3ndo' size='340' side='right'caption='[[3ndo]], [[Resolution|resolution]] 1.25&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3ndo]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_smegmatis"_trevisan_1889 "bacillus smegmatis" trevisan 1889]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NDO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NDO FirstGlance]. <br>
<table><tr><td colspan='2'>[[3ndo]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycolicibacterium_smegmatis Mycolicibacterium smegmatis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NDO FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.25&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">deoC, MSMEG_0922 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1772 "Bacillus smegmatis" Trevisan 1889])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NH4:AMMONIUM+ION'>NH4</scene>, <scene name='pdbligand=UNL:UNKNOWN+LIGAND'>UNL</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Deoxyribose-phosphate_aldolase Deoxyribose-phosphate aldolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.2.4 4.1.2.4] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ndo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ndo OCA], [https://pdbe.org/3ndo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ndo RCSB], [https://www.ebi.ac.uk/pdbsum/3ndo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ndo ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ndo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ndo OCA], [http://pdbe.org/3ndo PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3ndo RCSB], [http://www.ebi.ac.uk/pdbsum/3ndo PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3ndo ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/A0QQY7_MYCS2 A0QQY7_MYCS2]] Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.[HAMAP-Rule:MF_00114][SAAS:SAAS00003211]  
[https://www.uniprot.org/uniprot/A0QQY7_MYCS2 A0QQY7_MYCS2] Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate.[HAMAP-Rule:MF_00114][SAAS:SAAS00003211]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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</div>
</div>
<div class="pdbe-citations 3ndo" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 3ndo" style="background-color:#fffaf0;"></div>
==See Also==
*[[Aldolase 3D structures|Aldolase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Bacillus smegmatis trevisan 1889]]
[[Category: Large Structures]]
[[Category: Deoxyribose-phosphate aldolase]]
[[Category: Mycolicibacterium smegmatis]]
[[Category: SSGCID]]
[[Category: SSGCID]]
[[Category: Structural genomic]]
[[Category: Als collaborative crystallography]]
[[Category: Deoxyribosephosphate aldolase]]
[[Category: Emerald biostructure]]
[[Category: Lyase]]
[[Category: Mycobacterium smegmati]]
[[Category: Niaid]]
[[Category: Nih]]
[[Category: Sbri]]
[[Category: Ssgcid]]
[[Category: Uw]]
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