2ehd: Difference between revisions

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[[Image:2ehd.jpg|left|200px]]


{{Structure
==Crystal Structure Analysis of Oxidoreductase==
|PDB= 2ehd |SIZE=350|CAPTION= <scene name='initialview01'>2ehd</scene>, resolution 2.4&Aring;
<StructureSection load='2ehd' size='340' side='right'caption='[[2ehd]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
|SITE= <scene name='pdbsite=AC1:Co+Binding+Site+For+Residue+A+1001'>AC1</scene> and <scene name='pdbsite=AC2:Co+Binding+Site+For+Residue+B+1002'>AC2</scene>
== Structural highlights ==
|LIGAND= <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>
<table><tr><td colspan='2'>[[2ehd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EHD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EHD FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
|GENE=  
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr>
|DOMAIN=
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ehd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ehd OCA], [https://pdbe.org/2ehd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ehd RCSB], [https://www.ebi.ac.uk/pdbsum/2ehd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ehd ProSAT], [https://www.topsan.org/Proteins/RSGI/2ehd TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ehd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ehd OCA], [http://www.ebi.ac.uk/pdbsum/2ehd PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2ehd RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/Q5SK86_THET8 Q5SK86_THET8]
 
== Evolutionary Conservation ==
'''Crystal Structure Analysis of Oxidoreductase'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/eh/2ehd_consurf.spt"</scriptWhenChecked>
2EHD is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EHD OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Thermus thermophilus]]
  </jmolCheckbox>
[[Category: Ebihara, A.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ehd ConSurf].
[[Category: Hikima, T.]]
<div style="clear:both"></div>
[[Category: Inoue, Y.]]
__TOC__
[[Category: Kamiya, N.]]
</StructureSection>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Large Structures]]
[[Category: national project on protein structural and functional analyse]]
[[Category: Thermus thermophilus HB8]]
[[Category: nppsfa]]
[[Category: Ebihara A]]
[[Category: oxidoreductase]]
[[Category: Hikima T]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: Inoue Y]]
[[Category: rossman fold]]
[[Category: Kamiya N]]
[[Category: rsgi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 02:49:11 2008''
Retrieved from "https://proteopedia.org/2ehd"