5ogi: Difference between revisions
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==Complex of a binding protein and human adenovirus C 5 hexon== | ==Complex of a binding protein and human adenovirus C 5 hexon== | ||
<StructureSection load='5ogi' size='340' side='right' caption='[[5ogi]], [[Resolution|resolution]] 2.80Å' scene=''> | <StructureSection load='5ogi' size='340' side='right'caption='[[5ogi]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[5ogi]] is a 2 chain structure with sequence from [ | <table><tr><td colspan='2'>[[5ogi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Human_adenovirus_5 Human adenovirus 5] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5OGI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5OGI FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DIO:1,4-DIETHYLENE+DIOXIDE'>DIO</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5ogi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5ogi OCA], [https://pdbe.org/5ogi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5ogi RCSB], [https://www.ebi.ac.uk/pdbsum/5ogi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5ogi ProSAT]</span></td></tr> | |||
</table> | </table> | ||
== Function == | == Function == | ||
[ | [https://www.uniprot.org/uniprot/CAPSH_ADE05 CAPSH_ADE05] Major capsid protein that self-associates to form 240 hexon trimers, each in the shape of a hexagon, building most of the pseudo T=25 capsid. Assembled into trimeric units with the help of the chaperone shutoff protein (By similarity). Transported by pre-protein VI to the nucleus where it associates with other structural proteins to form an empty capsid. Might be involved, through its interaction with host dyneins, in the intracellular microtubule-dependent transport of incoming viral capsid to the nucleus. | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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</div> | </div> | ||
<div class="pdbe-citations 5ogi" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 5ogi" style="background-color:#fffaf0;"></div> | ||
==See Also== | |||
*[[Antibody 3D structures|Antibody 3D structures]] | |||
*[[Monoclonal Antibodies 3D structures|Monoclonal Antibodies 3D structures]] | |||
*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]] | |||
*[[3D structures of non-human antibody|3D structures of non-human antibody]] | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Human adenovirus 5]] | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: Braun | [[Category: Mus musculus]] | ||
[[Category: Dreier | [[Category: Braun L]] | ||
[[Category: Eibauer | [[Category: Dreier B]] | ||
[[Category: Ernst | [[Category: Eibauer M]] | ||
[[Category: Greber | [[Category: Ernst P]] | ||
[[Category: Honegger | [[Category: Greber UF]] | ||
[[Category: Kipar | [[Category: Honegger A]] | ||
[[Category: Medalia | [[Category: Kipar A]] | ||
[[Category: Plueckthun | [[Category: Medalia O]] | ||
[[Category: Schmid | [[Category: Plueckthun A]] | ||
[[Category: Stauffer | [[Category: Schmid M]] | ||
[[Category: Suomalainen | [[Category: Stauffer S]] | ||
[[Category: Thom | [[Category: Suomalainen M]] | ||
[[Category: Vogel | [[Category: Thom C]] | ||
[[Category: Zimmermann | [[Category: Vogel V]] | ||
[[Category: Zimmermann M]] | |||