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==Crystal Structure of the Second beta-Prism Domain of RbmC from V. cholerae bound to Mannotriose==
==Crystal Structure of the Second beta-Prism Domain of RbmC from V. cholerae bound to Mannotriose==
<StructureSection load='5v6f' size='340' side='right' caption='[[5v6f]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
<StructureSection load='5v6f' size='340' side='right'caption='[[5v6f]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5v6f]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibch Vibch]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V6F OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5V6F FirstGlance]. <br>
<table><tr><td colspan='2'>[[5v6f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5V6F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5V6F FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5v6c|5v6c]], [[5v6k|5v6k]]</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VC_0930 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=243277 VIBCH])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5v6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v6f OCA], [https://pdbe.org/5v6f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5v6f RCSB], [https://www.ebi.ac.uk/pdbsum/5v6f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5v6f ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5v6f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5v6f OCA], [http://pdbe.org/5v6f PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5v6f RCSB], [http://www.ebi.ac.uk/pdbsum/5v6f PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5v6f ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9KTH2_VIBCH Q9KTH2_VIBCH]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Vibch]]
[[Category: Large Structures]]
[[Category: Case, B C]]
[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
[[Category: De, S]]
[[Category: Case BC]]
[[Category: Kaus, K]]
[[Category: De S]]
[[Category: Olson, R]]
[[Category: Kaus K]]
[[Category: Sinclair, S]]
[[Category: Olson R]]
[[Category: Beta-prism]]
[[Category: Sinclair S]]
[[Category: Glycan-binding domain]]
[[Category: Lectin]]
[[Category: Mannotriose]]
[[Category: Sugar binding protein]]