2fki: Difference between revisions

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[[Image:2fki.gif|left|200px]]


{{Structure
==NMR Structure of Protein yjbR from Escherichia coli; Northeast Structural Genomics Consortium Target ER226==
|PDB= 2fki |SIZE=350|CAPTION= <scene name='initialview01'>2fki</scene>
<StructureSection load='2fki' size='340' side='right'caption='[[2fki]]' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2fki]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FKI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FKI FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
|GENE= yjbR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fki OCA], [https://pdbe.org/2fki PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fki RCSB], [https://www.ebi.ac.uk/pdbsum/2fki PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fki ProSAT], [https://www.topsan.org/Proteins/NESGC/2fki TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2315 MmcQ]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2fki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fki OCA], [http://www.ebi.ac.uk/pdbsum/2fki PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2fki RCSB]</span>
[https://www.uniprot.org/uniprot/YJBR_ECOLI YJBR_ECOLI]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''NMR Structure of Protein yjbR from Escherichia coli; Northeast Structural Genomics Consortium Target ER226'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fk/2fki_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2FKI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FKI OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==Reference==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fki ConSurf].
NMR structure of protein yjbR from Escherichia coli reveals 'double-wing' DNA binding motif., Singarapu KK, Liu G, Xiao R, Bertonati C, Honig B, Montelione GT, Szyperski T, Proteins. 2007 May 1;67(2):501-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17266124 17266124]
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Liu, G.]]
[[Category: Liu G]]
[[Category: Montelione, G T.]]
[[Category: Montelione GT]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Shetty KG]]
[[Category: Shetty, K G.]]
[[Category: Singarapu KK]]
[[Category: Singarapu, K K.]]
[[Category: Szyperski T]]
[[Category: Szyperski, T.]]
[[Category: Xiao R]]
[[Category: Xiao, R.]]
[[Category: alpha-beta]]
[[Category: er226]]
[[Category: gft-nmr]]
[[Category: nesg]]
[[Category: northeast structural genomics consortium]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:04:02 2008''

Latest revision as of 18:56, 29 May 2024

NMR Structure of Protein yjbR from Escherichia coli; Northeast Structural Genomics Consortium Target ER226

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