1v94: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Crystal structure of isocitrate dehydrogenase from Aeropyrum pernix==
==Crystal structure of isocitrate dehydrogenase from Aeropyrum pernix==
<StructureSection load='1v94' size='340' side='right' caption='[[1v94]], [[Resolution|resolution]] 2.28&Aring;' scene=''>
<StructureSection load='1v94' size='340' side='right'caption='[[1v94]], [[Resolution|resolution]] 2.28&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1v94]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Aerpx Aerpx]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V94 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1V94 FirstGlance]. <br>
<table><tr><td colspan='2'>[[1v94]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aeropyrum_pernix Aeropyrum pernix]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1V94 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1V94 FirstGlance]. <br>
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">APE0689 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=56636 AERPX])</td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.28&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Isocitrate_dehydrogenase_(NADP(+)) Isocitrate dehydrogenase (NADP(+))], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.1.1.42 1.1.1.42] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1v94 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v94 OCA], [https://pdbe.org/1v94 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1v94 RCSB], [https://www.ebi.ac.uk/pdbsum/1v94 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1v94 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1v94 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1v94 OCA], [http://pdbe.org/1v94 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1v94 RCSB], [http://www.ebi.ac.uk/pdbsum/1v94 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1v94 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9YE81_AERPE Q9YE81_AERPE]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 14:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v9/1v94_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/v9/1v94_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 20: Line 21:


==See Also==
==See Also==
*[[Isocitrate dehydrogenase|Isocitrate dehydrogenase]]
*[[Isocitrate dehydrogenase 3D structures|Isocitrate dehydrogenase 3D structures]]
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Aerpx]]
[[Category: Aeropyrum pernix]]
[[Category: Fushinobu, S]]
[[Category: Large Structures]]
[[Category: Jeong, J J]]
[[Category: Fushinobu S]]
[[Category: Shoun, H]]
[[Category: Jeong J-J]]
[[Category: Sonoda, T]]
[[Category: Shoun H]]
[[Category: Wakagi, T]]
[[Category: Sonoda T]]
[[Category: Layer]]
[[Category: Wakagi T]]
[[Category: Alpha/beta/alpha]]
[[Category: Isocitrate dehydrogenase]]
[[Category: Oxidoreductase]]