1m4w: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:


==Thermophilic b-1,4-xylanase from Nonomuraea flexuosa==
==Thermophilic b-1,4-xylanase from Nonomuraea flexuosa==
<StructureSection load='1m4w' size='340' side='right' caption='[[1m4w]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
<StructureSection load='1m4w' size='340' side='right'caption='[[1m4w]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[1m4w]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/"acetomadura_flexuosa"_krasil'nikov_and_agre_1964 "acetomadura flexuosa" krasil'nikov and agre 1964]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M4W OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1M4W FirstGlance]. <br>
<table><tr><td colspan='2'>[[1m4w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermopolyspora_flexuosa Thermopolyspora flexuosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M4W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M4W FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Endo-1,4-beta-xylanase Endo-1,4-beta-xylanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.8 3.2.1.8] </span></td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1m4w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m4w OCA], [http://pdbe.org/1m4w PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1m4w RCSB], [http://www.ebi.ac.uk/pdbsum/1m4w PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1m4w ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m4w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m4w OCA], [https://pdbe.org/1m4w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m4w RCSB], [https://www.ebi.ac.uk/pdbsum/1m4w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m4w ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q8GMV7_9ACTN Q8GMV7_9ACTN]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 13: Line 15:
   <jmolCheckbox>
   <jmolCheckbox>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m4/1m4w_consurf.spt"</scriptWhenChecked>
     <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m4/1m4w_consurf.spt"</scriptWhenChecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
     <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
Line 31: Line 33:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Acetomadura flexuosa krasil'nikov and agre 1964]]
[[Category: Large Structures]]
[[Category: Endo-1,4-beta-xylanase]]
[[Category: Thermopolyspora flexuosa]]
[[Category: Hakulinen, N]]
[[Category: Hakulinen N]]
[[Category: Janis, J]]
[[Category: Janis J]]
[[Category: Leisola, M]]
[[Category: Leisola M]]
[[Category: Rouvinen, J]]
[[Category: Rouvinen J]]
[[Category: Turunen, O]]
[[Category: Turunen O]]
[[Category: Family 11]]
[[Category: Glycosyl hydrolase]]
[[Category: Hydrolase]]
[[Category: Thermostability]]
[[Category: Xylanase]]

Latest revision as of 07:00, 30 October 2024

Thermophilic b-1,4-xylanase from Nonomuraea flexuosa

1m4w, resolution 2.10Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA