2gmy: Difference between revisions

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[[Image:2gmy.gif|left|200px]]


{{Structure
==Crystal Structure of a Protein of Unknown Function ATU0492 from Agrobacterium tumefaciens, Putative Antioxidant Defence Protein AhpD==
|PDB= 2gmy |SIZE=350|CAPTION= <scene name='initialview01'>2gmy</scene>, resolution 1.60&Aring;
<StructureSection load='2gmy' size='340' side='right'caption='[[2gmy]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND=  
<table><tr><td colspan='2'>[[2gmy]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GMY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GMY FirstGlance]. <br>
|ACTIVITY=  
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
|GENE= GI:17934405 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=358 Agrobacterium tumefaciens])
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gmy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gmy OCA], [https://pdbe.org/2gmy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gmy RCSB], [https://www.ebi.ac.uk/pdbsum/2gmy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gmy ProSAT], [https://www.topsan.org/Proteins/MCSG/2gmy TOPSAN]</span></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2128 COG2128]</span>
</table>
|RELATEDENTRY=
== Function ==
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2gmy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gmy OCA], [http://www.ebi.ac.uk/pdbsum/2gmy PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2gmy RCSB]</span>
[https://www.uniprot.org/uniprot/Q7D1C9_AGRFC Q7D1C9_AGRFC]
}}
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
'''Crystal Structure of a Protein of Unknown Function ATU0492 from Agrobacterium tumefaciens, Putative Antioxidant Defence Protein AhpD'''
Check<jmol>
 
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/2gmy_consurf.spt"</scriptWhenChecked>
==About this Structure==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
2GMY is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GMY OCA].  
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Agrobacterium tumefaciens]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gmy ConSurf].
[[Category: Edwards, A.]]
<div style="clear:both"></div>
[[Category: Gu, J.]]
__TOC__
[[Category: Joachimiak, A.]]
</StructureSection>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Savchenko, A.]]
[[Category: Large Structures]]
[[Category: Xu, X.]]
[[Category: Edwards A]]
[[Category: Zhang, R.]]
[[Category: Gu J]]
[[Category: agrobacterium tumefacien]]
[[Category: Joachimiak A]]
[[Category: mcsg]]
[[Category: Savchenko A]]
[[Category: midwest center for structural genomic]]
[[Category: Xu X]]
[[Category: protein structure initiative]]
[[Category: Zhang R]]
[[Category: psi]]
[[Category: structural genomic]]
 
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Retrieved from "https://proteopedia.org/2gmy"