5nrq: Difference between revisions

(3 intermediate revisions by the same user not shown)

Line 1:

~~'''Unreleased structure'''~~

~~The entry~~ 5nrq is ~~ON HOLD until Jul 24 2019~~

==Mtb TMK crystal structure in complex with compound 33==

== Structural highlights ==

<table><tr><td colspan='2'>[[5nrq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NRQ OCA]. For a guided tour on the structure components use [https://proteopedia.org/fgij/fg.htm?mol=5NRQ FirstGlance].

</td></tr><tr id='method'><td class="sblockLbl">[[Empirical_models|Method:]]</td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1Å</td></tr>

<tr id='ligand'><td class="sblockLbl">[[Ligand|Ligands:]]</td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZUI:1-[1-[[5-(3-chloranylphenoxy)pyridin-3-yl]methyl]piperidin-4-yl]-5-methyl-pyrimidine-2,4-dione'>ZUI</scene></td></tr>

<tr id='resources'><td class="sblockLbl">Resources:</td><td class="sblockDat">[https://proteopedia.org/fgij/fg.htm?mol=5nrq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nrq OCA], [https://pdbe.org/5nrq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nrq RCSB], [https://www.ebi.ac.uk/pdbsum/5nrq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nrq ProSAT]</td></tr>

</table>

== Function ==

[https://www.uniprot.org/uniprot/KTHY_MYCTU KTHY_MYCTU] Catalyzes the reversible phosphorylation of deoxythymidine monophosphate (dTMP) to deoxythymidine diphosphate (dTDP), using ATP as its preferred phosphoryl donor. Situated at the junction of both de novo and salvage pathways of deoxythymidine triphosphate (dTTP) synthesis, is essential for DNA synthesis and cellular growth. Has a broad specificity for nucleoside triphosphates, being highly active with ATP or dATP as phosphate donors, and less active with ITP, GTP, CTP and UTP.[HAMAP-Rule:MF_00165]

~~Authors: Merceron, R., Song, L., Munier-Lehmann, H., Van Calenbergh, S., Savvides, S.~~

==See Also==

*[[Thymidylate kinase 3D structures|Thymidylate kinase 3D structures]]

~~Description~~: ~~Mtb TMK crystal structure in complex with compound 33~~

__TOC__

[[Category: ~~Unreleased Structures~~]]

</StructureSection>

[[Category: ~~Van Calenbergh, S~~]]

[[Category: Large Structures]]

[[Category: Munier-Lehmann, H]]

[[Category: Mycobacterium tuberculosis H37Rv]]

[[Category: ~~Song, L~~]]

[[Category: Merceron R]]

[[Category: ~~Savvides, S~~]]

[[Category: Munier-Lehmann H]]

[[Category: ~~Merceron, R~~]]

[[Category: Savvides S]]

[[Category: Song L]]

[[Category: Van Calenbergh S]]

Navigation menu

Page actions

Page actions

Personal tools

Navigation

Search

Tools

@@ Line 1: / Line 1: @@
-'''Unreleased structure'''
-The entry 5nrq is ON HOLD  until Jul 24 2019
+==Mtb TMK crystal structure in complex with compound 33==
+<StructureSection load='5nrq' size='340' side='right'caption='[[5nrq]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5nrq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycobacterium_tuberculosis_H37Rv Mycobacterium tuberculosis H37Rv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5NRQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5NRQ FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZUI:1-[1-[[5-(3-chloranylphenoxy)pyridin-3-yl]methyl]piperidin-4-yl]-5-methyl-pyrimidine-2,4-dione'>ZUI</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5nrq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5nrq OCA], [https://pdbe.org/5nrq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5nrq RCSB], [https://www.ebi.ac.uk/pdbsum/5nrq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5nrq ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/KTHY_MYCTU KTHY_MYCTU] Catalyzes the reversible phosphorylation of deoxythymidine monophosphate (dTMP) to deoxythymidine diphosphate (dTDP), using ATP as its preferred phosphoryl donor. Situated at the junction of both de novo and salvage pathways of deoxythymidine triphosphate (dTTP) synthesis, is essential for DNA synthesis and cellular growth. Has a broad specificity for nucleoside triphosphates, being highly active with ATP or dATP as phosphate donors, and less active with ITP, GTP, CTP and UTP.[HAMAP-Rule:MF_00165]
-Authors: Merceron, R., Song, L., Munier-Lehmann, H., Van Calenbergh, S., Savvides, S.
+==See Also==
+*[[Thymidylate kinase 3D structures|Thymidylate kinase 3D structures]]
-Description: Mtb TMK crystal structure in complex with compound 33
+__TOC__
-[[Category: Unreleased Structures]]
+</StructureSection>
-[[Category: Van Calenbergh, S]]
+[[Category: Large Structures]]
-[[Category: Munier-Lehmann, H]]
+[[Category: Mycobacterium tuberculosis H37Rv]]
-[[Category: Song, L]]
+[[Category: Merceron R]]
-[[Category: Savvides, S]]
+[[Category: Munier-Lehmann H]]
-[[Category: Merceron, R]]
+[[Category: Savvides S]]
+[[Category: Song L]]
+[[Category: Van Calenbergh S]]