6d3m: Difference between revisions
From Proteopedia
Jump to navigationJump to search
New page: '''Unreleased structure''' The entry 6d3m is ON HOLD Authors: Rydel, T.J., Halls, C.E. Description: FT_T dioxygenase with bound quizalofop Category: Unreleased Structures [[Categor... |
No edit summary |
||
| (5 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==FT_T dioxygenase with bound quizalofop== | |||
<StructureSection load='6d3m' size='340' side='right'caption='[[6d3m]], [[Resolution|resolution]] 2.03Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[6d3m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingobium_herbicidovorans Sphingobium herbicidovorans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6D3M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6D3M FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.03Å</td></tr> | |||
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=FTJ:(2R)-2-{4-[(6-chloroquinoxalin-2-yl)oxy]phenoxy}propanoic+acid'>FTJ</scene></td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6d3m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6d3m OCA], [https://pdbe.org/6d3m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6d3m RCSB], [https://www.ebi.ac.uk/pdbsum/6d3m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6d3m ProSAT]</span></td></tr> | |||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/RDPA_SPHHM RDPA_SPHHM] Involved in the degradation of the phenoxypropionate herbicides. Catalyzes the enantiospecific cleavage of the ether bond in the herbicid R-dichlorprop ((R)-2-(2,4-dichlorophenoxy)propionate)(R-2,4-DP) and R-mecoprop ((R)-2-(4-chloro-2-methylphenoxy)propionate)(R-2,4-MCPP). It can also accept (RS)-4-chlorophenoxypropanoate, however it can only accept 2-oxoglutarate as oxygen acceptor.<ref>PMID:16731970</ref> <ref>PMID:16820480</ref> <ref>PMID:11423952</ref> | |||
==See Also== | |||
*[[Dioxygenase 3D structures|Dioxygenase 3D structures]] | |||
== References == | |||
[[Category: | <references/> | ||
[[Category: Halls | __TOC__ | ||
[[Category: Rydel | </StructureSection> | ||
[[Category: Large Structures]] | |||
[[Category: Sphingobium herbicidovorans]] | |||
[[Category: Halls CE]] | |||
[[Category: Rydel TJ]] | |||
Latest revision as of 14:32, 13 March 2024
FT_T dioxygenase with bound quizalofop
| ||||||||||||
