6d9w: Difference between revisions

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New page: '''Unreleased structure''' The entry 6d9w is ON HOLD Authors: Gaudet, R., Bane, L.B., Weihofen, W.A., Singharoy, A., Zimanyi, C.M., Bozzi, A.T. Description: Crystal structure of Deinoc...
 
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'''Unreleased structure'''


The entry 6d9w is ON HOLD
==Crystal structure of Deinococcus radiodurans MntH, an Nramp-family transition metal transporter, in the inward-open apo state==
<StructureSection load='6d9w' size='340' side='right'caption='[[6d9w]], [[Resolution|resolution]] 3.94&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[6d9w]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6D9W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6D9W FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.941&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=OS:OSMIUM+ION'>OS</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6d9w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6d9w OCA], [https://pdbe.org/6d9w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6d9w RCSB], [https://www.ebi.ac.uk/pdbsum/6d9w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6d9w ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/MNTH_DEIRA MNTH_DEIRA] H(+)-stimulated, divalent metal cation uptake system.
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Nramp family transporters-expressed in organisms from bacteria to humans-enable uptake of essential divalent transition metals via an alternating-access mechanism that also involves proton transport. We present high-resolution structures of Deinococcus radiodurans (Dra)Nramp in multiple conformations to provide a thorough description of the Nramp transport cycle by identifying the key intramolecular rearrangements and changes to the metal coordination sphere. Strikingly, while metal transport requires cycling from outward- to inward-open states, efficient proton transport still occurs in outward-locked (but not inward-locked) DraNramp. We propose a model in which metal and proton enter the transporter via the same external pathway to the binding site, but follow separate routes to the cytoplasm, which could facilitate the co-transport of two cationic species. Our results illustrate the flexibility of the LeuT fold to support a broad range of substrate transport and conformational change mechanisms.


Authors: Gaudet, R., Bane, L.B., Weihofen, W.A., Singharoy, A., Zimanyi, C.M., Bozzi, A.T.
Structures in multiple conformations reveal distinct transition metal and proton pathways in an Nramp transporter.,Bozzi AT, Zimanyi CM, Nicoludis JM, Lee BK, Zhang CH, Gaudet R Elife. 2019 Feb 4;8. pii: 41124. doi: 10.7554/eLife.41124. PMID:30714568<ref>PMID:30714568</ref>


Description: Crystal structure of Deinococcus radiodurans MntH, an Nramp-family transition metal transporter, in the inward-open apo state
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
[[Category: Unreleased Structures]]
</div>
[[Category: Singharoy, A]]
<div class="pdbe-citations 6d9w" style="background-color:#fffaf0;"></div>
[[Category: Gaudet, R]]
== References ==
[[Category: Zimanyi, C.M]]
<references/>
[[Category: Weihofen, W.A]]
__TOC__
[[Category: Bozzi, A.T]]
</StructureSection>
[[Category: Bane, L.B]]
[[Category: Deinococcus radiodurans R1]]
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Bane LB]]
[[Category: Bozzi AT]]
[[Category: Gaudet R]]
[[Category: Singharoy A]]
[[Category: Weihofen WA]]
[[Category: Zimanyi CM]]
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