2i2v: Difference between revisions

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[[Image:2i2v.gif|left|200px]]
#REDIRECT [[4v50]] This PDB entry is obsolete and replaced by 4v50
 
{{Structure
|PDB= 2i2v |SIZE=350|CAPTION= <scene name='initialview01'>2i2v</scene>, resolution 3.220&Aring;
|SITE=
|LIGAND= <scene name='pdbligand=A:ADENOSINE-5&#39;-MONOPHOSPHATE'>A</scene>, <scene name='pdbligand=C:CYTIDINE-5&#39;-MONOPHOSPHATE'>C</scene>, <scene name='pdbligand=G:GUANOSINE-5&#39;-MONOPHOSPHATE'>G</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=U:URIDINE-5&#39;-MONOPHOSPHATE'>U</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|ACTIVITY=
|GENE=
|DOMAIN=
|RELATEDENTRY=[[2i2p|2I2P]], [[2i2t|2I2T]], [[2i2u|2I2U]]
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i2v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i2v OCA], [http://www.ebi.ac.uk/pdbsum/2i2v PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2i2v RCSB]</span>
}}
 
'''Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. This file contains the 50s subunit of one 70s ribosome. The entire crystal structure contains two 70s ribosomes and is described in remark 400.'''
 
 
==Overview==
Protein synthesis requires the accurate positioning of mRNA and tRNA in the peptidyl-tRNA site of the ribosome. Here we describe x-ray crystal structures of the intact bacterial ribosome from Escherichia coli in a complex with mRNA and the anticodon stem-loop of P-site tRNA. At 3.5-A resolution, these structures reveal rearrangements in the intact ribosome that clamp P-site tRNA and mRNA on the small ribosomal subunit. Binding of the anticodon stem-loop of P-site tRNA to the ribosome is sufficient to lock the head of the small ribosomal subunit in a single conformation, thereby preventing movement of mRNA and tRNA before mRNA decoding.
 
==About this Structure==
2I2V is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I2V OCA].
 
==Reference==
Structural basis for mRNA and tRNA positioning on the ribosome., Berk V, Zhang W, Pai RD, Cate JH, Proc Natl Acad Sci U S A. 2006 Oct 24;103(43):15830-4. Epub 2006 Oct 12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17038497 17038497]
[[Category: Escherichia coli]]
[[Category: Protein complex]]
[[Category: Berk, V.]]
[[Category: Cate, J H.D.]]
[[Category: Pai, R D.]]
[[Category: Zhang, W.]]
[[Category: protein-nucleic acid complex]]
[[Category: ribosome]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:39:00 2008''

Latest revision as of 15:11, 10 December 2014

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