6d0o: Difference between revisions
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==rdpA dioxygenase holoenzyme== | |||
<StructureSection load='6d0o' size='340' side='right'caption='[[6d0o]], [[Resolution|resolution]] 2.30Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[6d0o]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Sphingobium_herbicidovorans_NBRC_16415 Sphingobium herbicidovorans NBRC 16415]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6D0O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6D0O FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3Å</td></tr> | |||
[[Category: | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene></td></tr> | ||
[[Category: | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6d0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6d0o OCA], [https://pdbe.org/6d0o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6d0o RCSB], [https://www.ebi.ac.uk/pdbsum/6d0o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6d0o ProSAT]</span></td></tr> | ||
[[Category: | </table> | ||
[[Category: | == Function == | ||
[[Category: | [https://www.uniprot.org/uniprot/RDPA_SPHHM RDPA_SPHHM] Involved in the degradation of the phenoxypropionate herbicides. Catalyzes the enantiospecific cleavage of the ether bond in the herbicid R-dichlorprop ((R)-2-(2,4-dichlorophenoxy)propionate)(R-2,4-DP) and R-mecoprop ((R)-2-(4-chloro-2-methylphenoxy)propionate)(R-2,4-MCPP). It can also accept (RS)-4-chlorophenoxypropanoate, however it can only accept 2-oxoglutarate as oxygen acceptor.<ref>PMID:16731970</ref> <ref>PMID:16820480</ref> <ref>PMID:11423952</ref> | ||
== References == | |||
<references/> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Large Structures]] | |||
[[Category: Sphingobium herbicidovorans NBRC 16415]] | |||
[[Category: Evdokimov A]] | |||
[[Category: Rydel TJ]] | |||
[[Category: Sturman EJ]] | |||
[[Category: Zheng M]] | |||
