2i9x: Difference between revisions

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[[Image:2i9x.gif|left|200px]]


{{Structure
==Structural Genomics, the crystal structure of SpoVG conserved domain from Staphylococcus epidermidis ATCC 12228==
|PDB= 2i9x |SIZE=350|CAPTION= <scene name='initialview01'>2i9x</scene>, resolution 1.80&Aring;
<StructureSection load='2i9x' size='340' side='right'caption='[[2i9x]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2i9x]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_epidermidis_ATCC_12228 Staphylococcus epidermidis ATCC 12228]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I9X OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I9X FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
|GENE= spoVG, SE_2285 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1282 Staphylococcus epidermidis])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG2088 SpoVG]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i9x OCA], [https://pdbe.org/2i9x PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i9x RCSB], [https://www.ebi.ac.uk/pdbsum/2i9x PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i9x ProSAT], [https://www.topsan.org/Proteins/MCSG/2i9x TOPSAN]</span></td></tr>
|RELATEDENTRY=[[2i9z|2I9Z]], [[2ia9|2IA9]]
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2i9x FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i9x OCA], [http://www.ebi.ac.uk/pdbsum/2i9x PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2i9x RCSB]</span>
== Evolutionary Conservation ==
}}
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
'''Structural Genomics, the crystal structure of SpoVG conserved domain from Staphylococcus epidermidis ATCC 12228'''
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i9/2i9x_consurf.spt"</scriptWhenChecked>
 
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
==About this Structure==
    <text>to colour the structure by Evolutionary Conservation</text>
2I9X is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Staphylococcus_epidermidis Staphylococcus epidermidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I9X OCA].  
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i9x ConSurf].
[[Category: Staphylococcus epidermidis]]
<div style="clear:both"></div>
[[Category: Bargassa, M.]]
__TOC__
[[Category: Joachimiak, A.]]
</StructureSection>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Large Structures]]
[[Category: Maltseva, N.]]
[[Category: Staphylococcus epidermidis ATCC 12228]]
[[Category: Tan, K.]]
[[Category: Bargassa M]]
[[Category: apc86317 1]]
[[Category: Joachimiak A]]
[[Category: mcsg]]
[[Category: Maltseva N]]
[[Category: midwest center for structural genomic]]
[[Category: Tan K]]
[[Category: protein structure initiative]]
[[Category: psi-2]]
[[Category: spovg]]
[[Category: staphylococcus epidermidis atcc 12228]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:41:27 2008''

Latest revision as of 01:03, 21 November 2024

Structural Genomics, the crystal structure of SpoVG conserved domain from Staphylococcus epidermidis ATCC 12228

2i9x, resolution 1.80Å

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