2idg: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2idg.gif|left|200px]]


{{Structure
==Crystal Structure of hypothetical protein AF0160 from Archaeoglobus fulgidus==
|PDB= 2idg |SIZE=350|CAPTION= <scene name='initialview01'>2idg</scene>, resolution 2.69&Aring;
<StructureSection load='2idg' size='340' side='right'caption='[[2idg]], [[Resolution|resolution]] 2.69&Aring;' scene=''>
|SITE=  
== Structural highlights ==
|LIGAND= <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
<table><tr><td colspan='2'>[[2idg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IDG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IDG FirstGlance]. <br>
|ACTIVITY=
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.69&#8491;</td></tr>
|GENE= AF_0160 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 Archaeoglobus fulgidus])
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=COG4904 COG4904]</span>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2idg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2idg OCA], [https://pdbe.org/2idg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2idg RCSB], [https://www.ebi.ac.uk/pdbsum/2idg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2idg ProSAT], [https://www.topsan.org/Proteins/SECSG/2idg TOPSAN]</span></td></tr>
|RELATEDENTRY=
</table>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2idg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2idg OCA], [http://www.ebi.ac.uk/pdbsum/2idg PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2idg RCSB]</span>
== Function ==
}}
[https://www.uniprot.org/uniprot/TTRD_ARCFU TTRD_ARCFU] Binds specifically to the Tat signal peptide of the TtrA subunit of the tetrathionate reductase.<ref>PMID:22289056</ref>
 
== Evolutionary Conservation ==
'''Crystal Structure of hypothetical protein AF0160 from Archaeoglobus fulgidus'''
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/id/2idg_consurf.spt"</scriptWhenChecked>
2IDG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IDG OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2idg ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Archaeoglobus fulgidus]]
[[Category: Archaeoglobus fulgidus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Chang, J.]]
[[Category: Chang J]]
[[Category: Chen, L.]]
[[Category: Chen L]]
[[Category: Li, Y.]]
[[Category: Li Y]]
[[Category: Liu, Z J.]]
[[Category: Liu ZJ]]
[[Category: Rose, J P.]]
[[Category: Rose JP]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Wang BC]]
[[Category: Wang, B C.]]
[[Category: Xu H]]
[[Category: Xu, H.]]
[[Category: Zhang M]]
[[Category: Zhang, M.]]
[[Category: Zhao M]]
[[Category: Zhao, M.]]
[[Category: af0160]]
[[Category: archaeoglobus fulgidus]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: secsg]]
[[Category: southeast collaboratory for structural genomic]]
[[Category: structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 03:42:49 2008''