5vyj: Difference between revisions

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==Crystal structure of the photosynthetic phosphoenolpyruvate carboxylase isoenzyme from maize in complex with Gly==
==Crystal structure of the photosynthetic phosphoenolpyruvate carboxylase isoenzyme from maize in complex with Gly==
<StructureSection load='5vyj' size='340' side='right' caption='[[5vyj]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
<StructureSection load='5vyj' size='340' side='right'caption='[[5vyj]], [[Resolution|resolution]] 3.30&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[5vyj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Maize Maize]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4uol 4uol]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VYJ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5VYJ FirstGlance]. <br>
<table><tr><td colspan='2'>[[5vyj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Zea_mays Zea mays]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=4uol 4uol]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5VYJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5VYJ FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene></td></tr>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.3&#8491;</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ppc1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4577 MAIZE])</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=GLY:GLYCINE'>GLY</scene></td></tr>
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Phosphoenolpyruvate_carboxylase Phosphoenolpyruvate carboxylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.1.1.31 4.1.1.31] </span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5vyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vyj OCA], [https://pdbe.org/5vyj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5vyj RCSB], [https://www.ebi.ac.uk/pdbsum/5vyj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5vyj ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5vyj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5vyj OCA], [http://pdbe.org/5vyj PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5vyj RCSB], [http://www.ebi.ac.uk/pdbsum/5vyj PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=5vyj ProSAT]</span></td></tr>
</table>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CAPP1_MAIZE CAPP1_MAIZE] Through the carboxylation of phosphoenolpyruvate (PEP) it forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Maize]]
[[Category: Large Structures]]
[[Category: Phosphoenolpyruvate carboxylase]]
[[Category: Zea mays]]
[[Category: Gonzalez-Segura, L]]
[[Category: Gonzalez-Segura L]]
[[Category: Guemez-Toro, R]]
[[Category: Guemez-Toro R]]
[[Category: Munoz-Clares, R A]]
[[Category: Munoz-Clares RA]]
[[Category: Allosteric activator]]
[[Category: C4 metabolism]]
[[Category: Lyase]]
[[Category: Pepc-c4]]